Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.07□□□□□ -0.32
CCL1P22362 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL1P22362 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL1P22362 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL1P22362 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 AC099568.2-201ENST00000609194 695 ntBASIC13.07□□□□□ -0.32
CCL1P22362 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.07□□□□□ -0.32
CCL1P22362 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 AC007431.3-201ENST00000623221 587 ntBASIC13.07□□□□□ -0.32
CCL1P22362 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 AC027601.5-201ENST00000624065 2482 ntBASIC13.07□□□□□ -0.32
CCL1P22362 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CCL1P22362 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 INTS4P2-202ENST00000614726 2019 ntBASIC13.06□□□□□ -0.32
CCL1P22362 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CCL1P22362 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
CCL1P22362 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL1P22362 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CCL1P22362 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.06□□□□□ -0.32
CCL1P22362 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CCL1P22362 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 AC120045.2-201ENST00000567334 178 ntBASIC13.06□□□□□ -0.32
CCL1P22362 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL1P22362 AL390955.2-201ENST00000603032 514 ntBASIC13.06□□□□□ -0.32
CCL1P22362 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL1P22362 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL1P22362 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.06□□□□□ -0.32
CCL1P22362 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.06□□□□□ -0.32
CCL1P22362 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
CCL1P22362 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CCL1P22362 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 AGGF1P1-201ENST00000509500 2073 ntBASIC13.06□□□□□ -0.32
CCL1P22362 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.06□□□□□ -0.32
CCL1P22362 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CCL1P22362 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
CCL1P22362 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CCL1P22362 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.05□□□□□ -0.32
CCL1P22362 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.05□□□□□ -0.32
CCL1P22362 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms