Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.74■□□□□ 0.27
GAP43P17677 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAP43P17677 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAP43P17677 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GAP43P17677 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAP43P17677 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
GAP43P17677 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAP43P17677 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAP43P17677 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAP43P17677 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
GAP43P17677 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GAP43P17677 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.73■□□□□ 0.27
GAP43P17677 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
GAP43P17677 CICP24-201ENST00000605464 2705 ntBASIC16.73■□□□□ 0.27
GAP43P17677 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
GAP43P17677 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
GAP43P17677 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.73■□□□□ 0.27
GAP43P17677 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GAP43P17677 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.73■□□□□ 0.27
GAP43P17677 AL035633.1-201ENST00000406139 838 ntBASIC16.73■□□□□ 0.27
GAP43P17677 AL512384.1-201ENST00000406683 331 ntBASIC16.73■□□□□ 0.27
GAP43P17677 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.73■□□□□ 0.27
GAP43P17677 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.73■□□□□ 0.27
GAP43P17677 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.73■□□□□ 0.27
GAP43P17677 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
GAP43P17677 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.73■□□□□ 0.27
GAP43P17677 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.73■□□□□ 0.27
GAP43P17677 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.73■□□□□ 0.27
GAP43P17677 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
GAP43P17677 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
GAP43P17677 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 MSTO2P-201ENST00000314835 1709 ntBASIC16.73■□□□□ 0.27
GAP43P17677 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC16.73■□□□□ 0.27
GAP43P17677 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
GAP43P17677 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.72■□□□□ 0.27
GAP43P17677 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
GAP43P17677 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.72■□□□□ 0.27
GAP43P17677 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.72■□□□□ 0.27
GAP43P17677 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GAP43P17677 AP002414.2-201ENST00000591780 3365 ntBASIC16.72■□□□□ 0.27
GAP43P17677 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.72■□□□□ 0.27
GAP43P17677 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.72■□□□□ 0.27
GAP43P17677 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.72■□□□□ 0.27
GAP43P17677 COX20P2-201ENST00000452636 358 ntBASIC16.72■□□□□ 0.27
GAP43P17677 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.72■□□□□ 0.27
GAP43P17677 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
GAP43P17677 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.72■□□□□ 0.27
GAP43P17677 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.72■□□□□ 0.27
GAP43P17677 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GAP43P17677 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 AC018665.1-201ENST00000622927 1362 ntBASIC16.72■□□□□ 0.27
GAP43P17677 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.72■□□□□ 0.27
GAP43P17677 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
GAP43P17677 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
GAP43P17677 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GAP43P17677 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
GAP43P17677 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAP43P17677 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAP43P17677 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
GAP43P17677 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
GAP43P17677 AC018442.1-201ENST00000421439 2061 ntBASIC16.71■□□□□ 0.27
GAP43P17677 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
GAP43P17677 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAP43P17677 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAP43P17677 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.71■□□□□ 0.27
GAP43P17677 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAP43P17677 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAP43P17677 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
GAP43P17677 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAP43P17677 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAP43P17677 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
GAP43P17677 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAP43P17677 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms