Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.44□□□□□ -0.1
NCK1P16333 ZNF259P1-201ENST00000407656 1365 ntBASIC14.44□□□□□ -0.1
NCK1P16333 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.44□□□□□ -0.1
NCK1P16333 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.44□□□□□ -0.1
NCK1P16333 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NCK1P16333 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.43□□□□□ -0.1
NCK1P16333 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 AL137784.3-201ENST00000623858 2288 ntBASIC14.43□□□□□ -0.1
NCK1P16333 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NCK1P16333 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
NCK1P16333 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.43□□□□□ -0.1
NCK1P16333 SPDYE17-201ENST00000412399 783 ntBASIC14.43□□□□□ -0.1
NCK1P16333 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.43□□□□□ -0.1
NCK1P16333 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.43□□□□□ -0.1
NCK1P16333 SLED1-202ENST00000512051 380 ntBASIC14.43□□□□□ -0.1
NCK1P16333 SLC25A1P1-201ENST00000528351 927 ntBASIC14.43□□□□□ -0.1
NCK1P16333 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.43□□□□□ -0.1
NCK1P16333 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.43□□□□□ -0.1
NCK1P16333 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.43□□□□□ -0.1
NCK1P16333 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.43□□□□□ -0.1
NCK1P16333 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
NCK1P16333 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NCK1P16333 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
NCK1P16333 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NCK1P16333 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NCK1P16333 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NCK1P16333 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.42□□□□□ -0.1
NCK1P16333 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.42□□□□□ -0.1
NCK1P16333 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NCK1P16333 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.42□□□□□ -0.1
NCK1P16333 MST1P2-201ENST00000457982 2291 ntBASIC14.42□□□□□ -0.1
NCK1P16333 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NCK1P16333 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.42□□□□□ -0.1
NCK1P16333 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.42□□□□□ -0.1
NCK1P16333 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.42□□□□□ -0.1
NCK1P16333 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.42□□□□□ -0.1
NCK1P16333 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.42□□□□□ -0.1
NCK1P16333 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.42□□□□□ -0.1
NCK1P16333 AC027601.4-201ENST00000611259 610 ntBASIC14.42□□□□□ -0.1
NCK1P16333 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NCK1P16333 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms