Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.87■□□□□ 0.29
COL11A1P12107 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
COL11A1P12107 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 PAUPAR-201ENST00000630360 2965 ntBASIC16.87■□□□□ 0.29
COL11A1P12107 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.87■□□□□ 0.29
COL11A1P12107 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
COL11A1P12107 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.87■□□□□ 0.29
COL11A1P12107 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
COL11A1P12107 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
COL11A1P12107 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
COL11A1P12107 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.87■□□□□ 0.29
COL11A1P12107 AC092978.1-202ENST00000637590 1327 ntBASIC16.87■□□□□ 0.29
COL11A1P12107 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.87■□□□□ 0.29
COL11A1P12107 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
COL11A1P12107 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC16.86■□□□□ 0.29
COL11A1P12107 AC253536.4-201ENST00000440539 267 ntBASIC16.86■□□□□ 0.29
COL11A1P12107 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.86■□□□□ 0.29
COL11A1P12107 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.86■□□□□ 0.29
COL11A1P12107 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.86■□□□□ 0.29
COL11A1P12107 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.86■□□□□ 0.29
COL11A1P12107 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
COL11A1P12107 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.86■□□□□ 0.29
COL11A1P12107 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.86■□□□□ 0.29
COL11A1P12107 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
COL11A1P12107 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 IGF1-203ENST00000392904 761 ntTSL 5 BASIC16.86■□□□□ 0.29
COL11A1P12107 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
COL11A1P12107 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.86■□□□□ 0.29
COL11A1P12107 AP000358.1-201ENST00000456260 156 ntBASIC16.86■□□□□ 0.29
COL11A1P12107 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.86■□□□□ 0.29
COL11A1P12107 AC008267.1-201ENST00000474858 1069 ntBASIC16.86■□□□□ 0.29
COL11A1P12107 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
COL11A1P12107 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.86■□□□□ 0.29
COL11A1P12107 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.86■□□□□ 0.29
COL11A1P12107 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
COL11A1P12107 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.86■□□□□ 0.29
COL11A1P12107 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.86■□□□□ 0.29
COL11A1P12107 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.85■□□□□ 0.29
COL11A1P12107 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
COL11A1P12107 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.85■□□□□ 0.29
COL11A1P12107 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.85■□□□□ 0.29
COL11A1P12107 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.85■□□□□ 0.29
COL11A1P12107 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
COL11A1P12107 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.85■□□□□ 0.29
COL11A1P12107 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.85■□□□□ 0.29
COL11A1P12107 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.85■□□□□ 0.29
COL11A1P12107 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.85■□□□□ 0.29
COL11A1P12107 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.85■□□□□ 0.29
COL11A1P12107 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.85■□□□□ 0.29
COL11A1P12107 AL353726.2-201ENST00000623259 884 ntBASIC16.85■□□□□ 0.29
COL11A1P12107 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.85■□□□□ 0.29
COL11A1P12107 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.85■□□□□ 0.29
COL11A1P12107 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.85■□□□□ 0.29
COL11A1P12107 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
COL11A1P12107 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
COL11A1P12107 AGAP7P-201ENST00000582299 2062 ntBASIC16.85■□□□□ 0.29
COL11A1P12107 AGAP14-201ENST00000624701 2060 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms