Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
THBS1P07996 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
THBS1P07996 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
THBS1P07996 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
THBS1P07996 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.04□□□□□ -0.16
THBS1P07996 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
THBS1P07996 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.04□□□□□ -0.16
THBS1P07996 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC14.04□□□□□ -0.16
THBS1P07996 AC007191.1-201ENST00000623179 2995 ntBASIC14.04□□□□□ -0.16
THBS1P07996 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
THBS1P07996 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
THBS1P07996 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
THBS1P07996 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 SPDYE19P-201ENST00000338590 713 ntBASIC14.03□□□□□ -0.16
THBS1P07996 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
THBS1P07996 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 AC005034.1-201ENST00000426657 489 ntBASIC14.03□□□□□ -0.16
THBS1P07996 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 VDAC1P7-201ENST00000462417 847 ntBASIC14.03□□□□□ -0.16
THBS1P07996 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 AC093004.1-201ENST00000508850 424 ntBASIC14.03□□□□□ -0.16
THBS1P07996 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.03□□□□□ -0.16
THBS1P07996 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 SPDYE22P-201ENST00000582158 798 ntBASIC14.03□□□□□ -0.16
THBS1P07996 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 BRI3BPP1-201ENST00000594224 787 ntBASIC14.03□□□□□ -0.16
THBS1P07996 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.03□□□□□ -0.16
THBS1P07996 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
THBS1P07996 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.03□□□□□ -0.16
THBS1P07996 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.03□□□□□ -0.16
THBS1P07996 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 AL157414.3-201ENST00000624276 1954 ntBASIC14.03□□□□□ -0.16
THBS1P07996 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.03□□□□□ -0.16
THBS1P07996 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
THBS1P07996 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.03□□□□□ -0.16
THBS1P07996 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
THBS1P07996 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.03□□□□□ -0.16
THBS1P07996 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
THBS1P07996 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
THBS1P07996 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
THBS1P07996 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
THBS1P07996 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
THBS1P07996 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
THBS1P07996 AC018529.2-202ENST00000611482 3087 ntBASIC14.02□□□□□ -0.16
THBS1P07996 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
THBS1P07996 AC005089.1-201ENST00000619486 2241 ntBASIC14.02□□□□□ -0.16
THBS1P07996 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.02□□□□□ -0.16
THBS1P07996 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
THBS1P07996 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
THBS1P07996 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
THBS1P07996 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
THBS1P07996 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
THBS1P07996 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
THBS1P07996 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
THBS1P07996 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
THBS1P07996 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
THBS1P07996 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
THBS1P07996 HCG24-202ENST00000414398 717 ntTSL 3 BASIC14.02□□□□□ -0.17
THBS1P07996 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.02□□□□□ -0.17
THBS1P07996 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.02□□□□□ -0.17
THBS1P07996 AC244107.1-201ENST00000442033 332 ntBASIC14.02□□□□□ -0.17
THBS1P07996 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.02□□□□□ -0.17
THBS1P07996 SERBP1P5-201ENST00000510079 1181 ntBASIC14.02□□□□□ -0.17
THBS1P07996 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.02□□□□□ -0.17
THBS1P07996 AC055876.2-201ENST00000531834 546 ntBASIC14.02□□□□□ -0.17
THBS1P07996 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.02□□□□□ -0.17
THBS1P07996 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.02□□□□□ -0.17
THBS1P07996 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.02□□□□□ -0.17
THBS1P07996 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
THBS1P07996 PRSS30P-206ENST00000641773 873 ntBASIC14.02□□□□□ -0.17
THBS1P07996 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
THBS1P07996 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
THBS1P07996 AC023908.3-201ENST00000564211 3047 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms