Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 BAK1P1-201ENST00000317045 636 ntBASIC19.47■□□□□ 0.71
COL5A2P05997 STK16-203ENST00000409516 895 ntTSL 2 BASIC19.47■□□□□ 0.71
COL5A2P05997 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC19.47■□□□□ 0.71
COL5A2P05997 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC19.47■□□□□ 0.71
COL5A2P05997 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC19.47■□□□□ 0.71
COL5A2P05997 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL5A2P05997 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.47■□□□□ 0.71
COL5A2P05997 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL5A2P05997 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC19.47■□□□□ 0.71
COL5A2P05997 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC19.47■□□□□ 0.71
COL5A2P05997 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 USP4-203ENST00000415188 1454 ntTSL 3 BASIC19.46■□□□□ 0.71
COL5A2P05997 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.46■□□□□ 0.71
COL5A2P05997 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC19.46■□□□□ 0.71
COL5A2P05997 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.46■□□□□ 0.71
COL5A2P05997 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC19.46■□□□□ 0.71
COL5A2P05997 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
COL5A2P05997 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL5A2P05997 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL5A2P05997 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC19.46■□□□□ 0.71
COL5A2P05997 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC19.46■□□□□ 0.71
COL5A2P05997 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC19.46■□□□□ 0.71
COL5A2P05997 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
COL5A2P05997 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL5A2P05997 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC19.45■□□□□ 0.7
COL5A2P05997 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.45■□□□□ 0.7
COL5A2P05997 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.45■□□□□ 0.7
COL5A2P05997 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 AC087481.3-201ENST00000602886 1894 ntBASIC19.45■□□□□ 0.7
COL5A2P05997 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 DPY19L2P5-201ENST00000456300 331 ntBASIC19.45■□□□□ 0.7
COL5A2P05997 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC19.45■□□□□ 0.7
COL5A2P05997 AC138701.2-201ENST00000553634 226 ntBASIC19.45■□□□□ 0.7
COL5A2P05997 DNM1P51-201ENST00000558149 522 ntBASIC19.45■□□□□ 0.7
COL5A2P05997 AL118516.1-201ENST00000564152 670 ntBASIC19.45■□□□□ 0.7
COL5A2P05997 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
COL5A2P05997 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC19.45■□□□□ 0.7
COL5A2P05997 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC19.45■□□□□ 0.7
COL5A2P05997 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COL5A2P05997 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.45■□□□□ 0.7
COL5A2P05997 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL5A2P05997 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL5A2P05997 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL5A2P05997 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.44■□□□□ 0.7
COL5A2P05997 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.44■□□□□ 0.7
COL5A2P05997 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.44■□□□□ 0.7
COL5A2P05997 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL5A2P05997 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC19.44■□□□□ 0.7
COL5A2P05997 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC19.44■□□□□ 0.7
COL5A2P05997 RN7SL277P-201ENST00000481521 288 ntBASIC19.44■□□□□ 0.7
COL5A2P05997 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL5A2P05997 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL5A2P05997 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL5A2P05997 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC19.44■□□□□ 0.7
COL5A2P05997 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.44■□□□□ 0.7
COL5A2P05997 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL5A2P05997 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL5A2P05997 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC19.44■□□□□ 0.7
COL5A2P05997 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.44■□□□□ 0.7
COL5A2P05997 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC19.44■□□□□ 0.7
COL5A2P05997 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
COL5A2P05997 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms