Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
APOA1P02647 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.65□□□□□ -0.22
APOA1P02647 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.65□□□□□ -0.22
APOA1P02647 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.65□□□□□ -0.22
APOA1P02647 AC138894.3-201ENST00000603787 634 ntBASIC13.65□□□□□ -0.22
APOA1P02647 ACTL9-202ENST00000612068 1252 ntBASIC13.65□□□□□ -0.22
APOA1P02647 AL645728.2-201ENST00000641974 660 ntBASIC13.65□□□□□ -0.22
APOA1P02647 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
APOA1P02647 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
APOA1P02647 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.64□□□□□ -0.23
APOA1P02647 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.64□□□□□ -0.23
APOA1P02647 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.64□□□□□ -0.23
APOA1P02647 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
APOA1P02647 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
APOA1P02647 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.64□□□□□ -0.23
APOA1P02647 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.64□□□□□ -0.23
APOA1P02647 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 AL805961.2-201ENST00000642139 4817 ntBASIC13.64□□□□□ -0.23
APOA1P02647 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.64□□□□□ -0.23
APOA1P02647 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.64□□□□□ -0.23
APOA1P02647 FAM185BP-201ENST00000443595 716 ntBASIC13.64□□□□□ -0.23
APOA1P02647 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.64□□□□□ -0.23
APOA1P02647 KRT18P31-201ENST00000506277 1292 ntBASIC13.64□□□□□ -0.23
APOA1P02647 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.64□□□□□ -0.23
APOA1P02647 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.64□□□□□ -0.23
APOA1P02647 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.64□□□□□ -0.23
APOA1P02647 AL031432.2-201ENST00000566714 459 ntBASIC13.64□□□□□ -0.23
APOA1P02647 AL928711.1-201ENST00000570165 459 ntBASIC13.64□□□□□ -0.23
APOA1P02647 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.64□□□□□ -0.23
APOA1P02647 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
APOA1P02647 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
APOA1P02647 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
APOA1P02647 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.64□□□□□ -0.23
APOA1P02647 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
APOA1P02647 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
APOA1P02647 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.64□□□□□ -0.23
APOA1P02647 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
APOA1P02647 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
APOA1P02647 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.64□□□□□ -0.23
APOA1P02647 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
APOA1P02647 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.63□□□□□ -0.23
APOA1P02647 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA1P02647 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.63□□□□□ -0.23
APOA1P02647 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.63□□□□□ -0.23
APOA1P02647 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC13.63□□□□□ -0.23
APOA1P02647 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.63□□□□□ -0.23
APOA1P02647 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA1P02647 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.63□□□□□ -0.23
APOA1P02647 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
APOA1P02647 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
APOA1P02647 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA1P02647 AC073439.1-201ENST00000624121 1774 ntBASIC13.63□□□□□ -0.23
APOA1P02647 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA1P02647 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.63□□□□□ -0.23
APOA1P02647 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOA1P02647 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
APOA1P02647 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
APOA1P02647 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA1P02647 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
APOA1P02647 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
APOA1P02647 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.63□□□□□ -0.23
APOA1P02647 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms