Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH16O75309 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH16O75309 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH16O75309 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH16O75309 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH16O75309 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.44■□□□□ 0.06
CDH16O75309 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH16O75309 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH16O75309 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH16O75309 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH16O75309 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH16O75309 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH16O75309 MKNK2P1-201ENST00000437526 628 ntBASIC15.43■□□□□ 0.06
CDH16O75309 ACTG1P14-201ENST00000446382 1122 ntBASIC15.43■□□□□ 0.06
CDH16O75309 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.43■□□□□ 0.06
CDH16O75309 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH16O75309 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.43■□□□□ 0.06
CDH16O75309 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.43■□□□□ 0.06
CDH16O75309 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH16O75309 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CDH16O75309 AC023511.2-201ENST00000618803 211 ntBASIC15.43■□□□□ 0.06
CDH16O75309 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH16O75309 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.43■□□□□ 0.06
CDH16O75309 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH16O75309 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CDH16O75309 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CDH16O75309 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.43■□□□□ 0.06
CDH16O75309 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDH16O75309 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH16O75309 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH16O75309 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CDH16O75309 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH16O75309 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CDH16O75309 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH16O75309 YBX2P1-201ENST00000394192 760 ntBASIC15.42■□□□□ 0.06
CDH16O75309 TIMM8BP1-201ENST00000452384 211 ntBASIC15.42■□□□□ 0.06
CDH16O75309 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.42■□□□□ 0.06
CDH16O75309 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.42■□□□□ 0.06
CDH16O75309 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 AC079781.5-202ENST00000641784 3743 ntBASIC15.42■□□□□ 0.06
CDH16O75309 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CDH16O75309 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CDH16O75309 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDH16O75309 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CDH16O75309 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.42■□□□□ 0.06
CDH16O75309 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CDH16O75309 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CDH16O75309 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.42■□□□□ 0.06
CDH16O75309 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.41■□□□□ 0.06
CDH16O75309 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms