Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SOCS3O14543 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.5□□□□□ -0.57
SOCS3O14543 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.49□□□□□ -0.57
SOCS3O14543 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 AL138799.1-201ENST00000448213 1675 ntBASIC11.49□□□□□ -0.57
SOCS3O14543 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.49□□□□□ -0.57
SOCS3O14543 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.49□□□□□ -0.57
SOCS3O14543 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.49□□□□□ -0.57
SOCS3O14543 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 AL157414.3-201ENST00000624276 1954 ntBASIC11.49□□□□□ -0.57
SOCS3O14543 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 SPDYE19P-201ENST00000338590 713 ntBASIC11.49□□□□□ -0.57
SOCS3O14543 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 AL645937.2-201ENST00000396808 931 ntBASIC11.49□□□□□ -0.57
SOCS3O14543 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.49□□□□□ -0.57
SOCS3O14543 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 MEP1AP4-201ENST00000423244 1087 ntBASIC11.49□□□□□ -0.57
SOCS3O14543 PMS2P2-201ENST00000425039 1128 ntBASIC11.49□□□□□ -0.57
SOCS3O14543 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SOCS3O14543 HLA-K-203ENST00000430151 1046 ntBASIC11.49□□□□□ -0.57
SOCS3O14543 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.49□□□□□ -0.57
SOCS3O14543 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.49□□□□□ -0.57
SOCS3O14543 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SOCS3O14543 GPALPP1-207ENST00000611650 899 ntBASIC11.49□□□□□ -0.57
SOCS3O14543 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
SOCS3O14543 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SOCS3O14543 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SOCS3O14543 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 NID2-208ENST00000617139 3827 ntTSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SOCS3O14543 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.48□□□□□ -0.57
SOCS3O14543 AC018442.1-201ENST00000421439 2061 ntBASIC11.48□□□□□ -0.57
SOCS3O14543 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SOCS3O14543 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.48□□□□□ -0.57
SOCS3O14543 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 PCDHA3-202ENST00000532566 4594 ntBASIC11.48□□□□□ -0.57
SOCS3O14543 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SOCS3O14543 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SOCS3O14543 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SOCS3O14543 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC11.48□□□□□ -0.57
SOCS3O14543 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
SOCS3O14543 VDAC1P7-201ENST00000462417 847 ntBASIC11.48□□□□□ -0.57
SOCS3O14543 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.48□□□□□ -0.57
SOCS3O14543 RPL13AP25-201ENST00000484130 612 ntBASIC11.48□□□□□ -0.57
SOCS3O14543 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC11.48□□□□□ -0.57
SOCS3O14543 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.48□□□□□ -0.57
SOCS3O14543 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC11.48□□□□□ -0.57
SOCS3O14543 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC11.48□□□□□ -0.57
SOCS3O14543 BRI3BPP1-201ENST00000594224 787 ntBASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms