Protein–RNA interactions for Protein: O00291

HIP1, Huntingtin-interacting protein 1, humanhuman

Predictions only

Length 1,037 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1O00291 CICP14-201ENST00000629111 2732 ntBASIC18.3■□□□□ 0.52
HIP1O00291 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIP1O00291 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIP1O00291 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIP1O00291 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HIP1O00291 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HIP1O00291 AC018665.1-201ENST00000622927 1362 ntBASIC18.3■□□□□ 0.52
HIP1O00291 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIP1O00291 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.29■□□□□ 0.52
HIP1O00291 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 AC023090.2-201ENST00000625182 2110 ntBASIC18.29■□□□□ 0.52
HIP1O00291 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HIP1O00291 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC18.29■□□□□ 0.52
HIP1O00291 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
HIP1O00291 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.29■□□□□ 0.52
HIP1O00291 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HIP1O00291 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.29■□□□□ 0.52
HIP1O00291 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HIP1O00291 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC18.29■□□□□ 0.52
HIP1O00291 EIF3FP3-201ENST00000434851 1086 ntBASIC18.29■□□□□ 0.52
HIP1O00291 AC011495.1-201ENST00000498085 584 ntBASIC18.29■□□□□ 0.52
HIP1O00291 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.29■□□□□ 0.52
HIP1O00291 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.29■□□□□ 0.52
HIP1O00291 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.29■□□□□ 0.52
HIP1O00291 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.29■□□□□ 0.52
HIP1O00291 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HIP1O00291 AC055811.4-201ENST00000624039 1754 ntBASIC18.29■□□□□ 0.52
HIP1O00291 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.29■□□□□ 0.52
HIP1O00291 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.29■□□□□ 0.52
HIP1O00291 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.29■□□□□ 0.52
HIP1O00291 MYO15B-237ENST00000642007 4893 ntBASIC18.29■□□□□ 0.52
HIP1O00291 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HIP1O00291 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HIP1O00291 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HIP1O00291 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HIP1O00291 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.28■□□□□ 0.52
HIP1O00291 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HIP1O00291 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.28■□□□□ 0.52
HIP1O00291 PTP4A1P2-201ENST00000546033 454 ntBASIC18.28■□□□□ 0.52
HIP1O00291 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 MIR3197-201ENST00000582241 73 ntBASIC18.28■□□□□ 0.52
HIP1O00291 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.28■□□□□ 0.52
HIP1O00291 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HIP1O00291 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HIP1O00291 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HIP1O00291 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.28■□□□□ 0.52
HIP1O00291 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.28■□□□□ 0.52
HIP1O00291 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC18.28■□□□□ 0.52
HIP1O00291 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HIP1O00291 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
HIP1O00291 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HIP1O00291 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HIP1O00291 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
HIP1O00291 AC007292.2-201ENST00000593524 1812 ntBASIC18.28■□□□□ 0.52
HIP1O00291 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC18.28■□□□□ 0.52
HIP1O00291 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HIP1O00291 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms