Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 EEF1DP6-201ENST00000449232 372 ntBASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 AC012618.1-201ENST00000461223 412 ntBASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 MIR4683-201ENST00000579659 81 ntBASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 AL162426.1-201ENST00000624141 743 ntBASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 PCDHA1-201ENST00000378133 2726 ntBASIC14.35□□□□□ -0.11
CCDC187A0A096LP49 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 RN7SKP175-201ENST00000408472 289 ntBASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AC006335.1-201ENST00000445200 547 ntBASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AC104073.2-201ENST00000453737 312 ntBASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AC026434.2-201ENST00000506094 1078 ntBASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 NAT9-224ENST00000583757 583 ntTSL 3 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AC005324.6-201ENST00000587972 613 ntBASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AL358472.3-201ENST00000608147 415 ntBASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AC068587.8-201ENST00000641239 219 ntBASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 REXO1L5P-201ENST00000622260 2098 ntBASIC14.34□□□□□ -0.11
CCDC187A0A096LP49 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC187A0A096LP49 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC187A0A096LP49 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
CCDC187A0A096LP49 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.33□□□□□ -0.11
CCDC187A0A096LP49 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.33□□□□□ -0.11
CCDC187A0A096LP49 AL157791.1-201ENST00000553667 1699 ntBASIC14.33□□□□□ -0.11
CCDC187A0A096LP49 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CCDC187A0A096LP49 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.33□□□□□ -0.11
CCDC187A0A096LP49 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 AL513523.2-202ENST00000427283 2040 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms