Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AC026797.1-201ENST00000624837 2869 ntBASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AL391647.1-201ENST00000395664 511 ntBASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 PPP1R14BP5-201ENST00000440334 435 ntBASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 CA15P1-201ENST00000481698 905 ntBASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 GRAMD4P4-201ENST00000613563 1115 ntBASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 GXYLT1P4-201ENST00000613576 1192 ntBASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AC130371.2-201ENST00000619443 611 ntBASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AC009474.1-201ENST00000455096 1565 ntBASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 TMEM94-201ENST00000314256 5213 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 AC090643.2-201ENST00000623442 2029 ntBASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 CSPG4P12-201ENST00000558282 4853 ntBASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC7.78□□□□□ -1.16
LINC01558Q9Y6Z2 CDK5RAP2-201ENST00000349780 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.16
LINC01558Q9Y6Z2 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
LINC01558Q9Y6Z2 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 AC122714.2-201ENST00000502787 707 ntBASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 AC079140.1-201ENST00000508039 487 ntBASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 SEMA6A-AS1-206ENST00000514214 782 ntTSL 3 BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
LINC01558Q9Y6Z2 MIR4313-201ENST00000580760 101 ntBASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms