Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 MIR557-201ENST00000385239 98 ntBASIC20.35■□□□□ 0.85
PHF8Q9UPP1 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 RBM8B-201ENST00000555532 525 ntBASIC20.35■□□□□ 0.85
PHF8Q9UPP1 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 MIR4522-201ENST00000584932 87 ntBASIC20.35■□□□□ 0.85
PHF8Q9UPP1 SIGLEC18P-201ENST00000602271 909 ntBASIC20.35■□□□□ 0.85
PHF8Q9UPP1 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC20.35■□□□□ 0.85
PHF8Q9UPP1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PHF8Q9UPP1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 AC090616.6-203ENST00000579186 1945 ntBASIC20.33■□□□□ 0.85
PHF8Q9UPP1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 XBP1P1-201ENST00000436573 652 ntBASIC20.33■□□□□ 0.85
PHF8Q9UPP1 PIN4P1-201ENST00000451079 396 ntBASIC20.33■□□□□ 0.85
PHF8Q9UPP1 AL035414.1-201ENST00000451327 857 ntBASIC20.33■□□□□ 0.85
PHF8Q9UPP1 BUD31-205ENST00000456893 512 ntTSL 5 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 RPL18AP3-201ENST00000462885 528 ntBASIC20.33■□□□□ 0.85
PHF8Q9UPP1 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 GCOM2-201ENST00000509133 1104 ntBASIC20.33■□□□□ 0.85
PHF8Q9UPP1 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 MIR3188-201ENST00000583494 85 ntBASIC20.33■□□□□ 0.85
PHF8Q9UPP1 MIR6858-201ENST00000620733 67 ntBASIC20.33■□□□□ 0.85
PHF8Q9UPP1 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PHF8Q9UPP1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PHF8Q9UPP1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.33■□□□□ 0.84
PHF8Q9UPP1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PHF8Q9UPP1 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PHF8Q9UPP1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PHF8Q9UPP1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PHF8Q9UPP1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.33■□□□□ 0.84
PHF8Q9UPP1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
PHF8Q9UPP1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
PHF8Q9UPP1 PKD1P1-201ENST00000458669 6805 ntBASIC20.33■□□□□ 0.84
PHF8Q9UPP1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.32■□□□□ 0.84
PHF8Q9UPP1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms