Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14□□□□□ -0.17
LRFN1Q9P244 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14□□□□□ -0.17
LRFN1Q9P244 ECM1P1-201ENST00000604092 1279 ntBASIC14□□□□□ -0.17
LRFN1Q9P244 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LRFN1Q9P244 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14□□□□□ -0.17
LRFN1Q9P244 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 AL354989.2-201ENST00000435838 1540 ntBASIC14□□□□□ -0.17
LRFN1Q9P244 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LRFN1Q9P244 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 AC132872.4-202ENST00000622924 2756 ntBASIC14□□□□□ -0.17
LRFN1Q9P244 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14□□□□□ -0.17
LRFN1Q9P244 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 AC245100.3-201ENST00000441281 285 ntBASIC13.99□□□□□ -0.17
LRFN1Q9P244 PFN1P12-201ENST00000455938 534 ntBASIC13.99□□□□□ -0.17
LRFN1Q9P244 RPL13AP20-201ENST00000459725 609 ntBASIC13.99□□□□□ -0.17
LRFN1Q9P244 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 AC022616.1-201ENST00000518688 554 ntBASIC13.99□□□□□ -0.17
LRFN1Q9P244 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 MIR4525-201ENST00000580000 75 ntBASIC13.99□□□□□ -0.17
LRFN1Q9P244 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 AC090616.6-203ENST00000579186 1945 ntBASIC13.99□□□□□ -0.17
LRFN1Q9P244 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.99□□□□□ -0.17
LRFN1Q9P244 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LRFN1Q9P244 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LRFN1Q9P244 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 FAM8A2P-201ENST00000528813 1142 ntBASIC13.98□□□□□ -0.17
LRFN1Q9P244 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.98□□□□□ -0.17
LRFN1Q9P244 ENPP7P14-201ENST00000621765 1040 ntBASIC13.98□□□□□ -0.17
LRFN1Q9P244 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms