Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL20A1Q9P218 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL20A1Q9P218 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
COL20A1Q9P218 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
COL20A1Q9P218 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
COL20A1Q9P218 ACE3P-201ENST00000423435 1973 ntBASIC17.04■□□□□ 0.32
COL20A1Q9P218 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.04■□□□□ 0.32
COL20A1Q9P218 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.04■□□□□ 0.32
COL20A1Q9P218 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
COL20A1Q9P218 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.04■□□□□ 0.32
COL20A1Q9P218 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.03■□□□□ 0.32
COL20A1Q9P218 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 AC010141.1-201ENST00000411585 623 ntBASIC17.03■□□□□ 0.32
COL20A1Q9P218 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 AL162426.1-201ENST00000624141 743 ntBASIC17.03■□□□□ 0.32
COL20A1Q9P218 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
COL20A1Q9P218 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
COL20A1Q9P218 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 SHC1P1-201ENST00000425230 1745 ntBASIC17.02■□□□□ 0.32
COL20A1Q9P218 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 AC138028.6-201ENST00000616106 1482 ntBASIC17.02■□□□□ 0.32
COL20A1Q9P218 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 AC016700.1-201ENST00000429424 312 ntBASIC17.02■□□□□ 0.32
COL20A1Q9P218 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 RNMTL1P1-201ENST00000454103 560 ntBASIC17.02■□□□□ 0.32
COL20A1Q9P218 SERPINA13P-202ENST00000478994 924 ntBASIC17.02■□□□□ 0.32
COL20A1Q9P218 ARTN-209ENST00000479128 471 ntTSL 3 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 AC244452.3-201ENST00000636814 210 ntBASIC17.02■□□□□ 0.32
COL20A1Q9P218 LINC00554-201ENST00000564841 3011 ntBASIC17.02■□□□□ 0.32
COL20A1Q9P218 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
COL20A1Q9P218 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.02■□□□□ 0.32
COL20A1Q9P218 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL20A1Q9P218 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.02■□□□□ 0.31
COL20A1Q9P218 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
COL20A1Q9P218 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL20A1Q9P218 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
COL20A1Q9P218 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
COL20A1Q9P218 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL20A1Q9P218 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
COL20A1Q9P218 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL20A1Q9P218 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.02■□□□□ 0.31
COL20A1Q9P218 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
COL20A1Q9P218 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
COL20A1Q9P218 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
COL20A1Q9P218 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms