Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.08□□□□□ -0.32
COMMD9Q9P000 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.08□□□□□ -0.32
COMMD9Q9P000 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
COMMD9Q9P000 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COMMD9Q9P000 OR2I1P-208ENST00000641137 4948 ntBASIC13.08□□□□□ -0.32
COMMD9Q9P000 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COMMD9Q9P000 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
COMMD9Q9P000 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.08□□□□□ -0.32
COMMD9Q9P000 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
COMMD9Q9P000 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.08□□□□□ -0.32
COMMD9Q9P000 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
COMMD9Q9P000 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
COMMD9Q9P000 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COMMD9Q9P000 TCAF1P1-201ENST00000414990 2232 ntBASIC13.08□□□□□ -0.32
COMMD9Q9P000 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
COMMD9Q9P000 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COMMD9Q9P000 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
COMMD9Q9P000 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.07□□□□□ -0.32
COMMD9Q9P000 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 AC079776.4-201ENST00000511039 504 ntBASIC13.07□□□□□ -0.32
COMMD9Q9P000 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 AL049840.3-201ENST00000602669 611 ntBASIC13.07□□□□□ -0.32
COMMD9Q9P000 AL691432.3-201ENST00000621860 400 ntBASIC13.07□□□□□ -0.32
COMMD9Q9P000 AC116407.3-201ENST00000623905 1129 ntBASIC13.07□□□□□ -0.32
COMMD9Q9P000 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 AC004899.2-201ENST00000622993 3860 ntBASIC13.07□□□□□ -0.32
COMMD9Q9P000 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.07□□□□□ -0.32
COMMD9Q9P000 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
COMMD9Q9P000 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC13.06□□□□□ -0.32
COMMD9Q9P000 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
COMMD9Q9P000 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms