Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC107918.2-201ENST00000530817 355 ntBASIC18.21■□□□□ 0.51
RTN4Q9NQC3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 AC091076.1-201ENST00000610741 619 ntBASIC18.21■□□□□ 0.51
RTN4Q9NQC3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 PAM-203ENST00000346918 3302 ntTSL 5 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC18.21■□□□□ 0.5
RTN4Q9NQC3 GSN-209ENST00000449733 2702 ntTSL 2 BASIC18.21■□□□□ 0.5
RTN4Q9NQC3 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
RTN4Q9NQC3 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RTN4Q9NQC3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.2■□□□□ 0.5
RTN4Q9NQC3 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 FTO-214ENST00000636218 2227 ntTSL 5 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 AC006504.4-201ENST00000592118 1568 ntBASIC18.2■□□□□ 0.5
RTN4Q9NQC3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 BEND3P3-201ENST00000611030 2440 ntBASIC18.2■□□□□ 0.5
RTN4Q9NQC3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTN4Q9NQC3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AC105250.1-201ENST00000509378 2057 ntBASIC18.19■□□□□ 0.5
RTN4Q9NQC3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AC016252.1-201ENST00000609721 474 ntBASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AC008267.7-201ENST00000624570 1194 ntBASIC18.19■□□□□ 0.5
RTN4Q9NQC3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 AL805961.1-202ENST00000641562 540 ntBASIC18.19■□□□□ 0.5
RTN4Q9NQC3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RTN4Q9NQC3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms