Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AL137783.1-201ENST00000623494 1896 ntBASIC14.57□□□□□ -0.08
BRF2Q9HAW0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
BRF2Q9HAW0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 C1QBPP1-201ENST00000400117 770 ntBASIC14.56□□□□□ -0.08
BRF2Q9HAW0 AL139094.1-201ENST00000405549 1188 ntBASIC14.56□□□□□ -0.08
BRF2Q9HAW0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 AJ011932.1-201ENST00000621707 465 ntBASIC14.56□□□□□ -0.08
BRF2Q9HAW0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 AL603764.1-201ENST00000636452 321 ntBASIC14.56□□□□□ -0.08
BRF2Q9HAW0 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 KRT8P14-201ENST00000414254 1442 ntBASIC14.56□□□□□ -0.08
BRF2Q9HAW0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
BRF2Q9HAW0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 AC018665.1-201ENST00000622927 1362 ntBASIC14.55□□□□□ -0.08
BRF2Q9HAW0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 KRT8P22-201ENST00000562317 1415 ntBASIC14.55□□□□□ -0.08
BRF2Q9HAW0 MTHFR-210ENST00000641407 2387 ntBASIC14.55□□□□□ -0.08
BRF2Q9HAW0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BRF2Q9HAW0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms