Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTFDC1Q9BY42 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTFDC1Q9BY42 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTFDC1Q9BY42 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTFDC1Q9BY42 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 DNM1P30-201ENST00000563586 452 ntBASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 AC135983.4-201ENST00000564116 1262 ntBASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 BX088702.1-201ENST00000610784 235 ntBASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 MIR6842-201ENST00000612539 65 ntBASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 AL157813.1-201ENST00000612996 587 ntBASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RTFDC1Q9BY42 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RTFDC1Q9BY42 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.21■□□□□ 0.5
RTFDC1Q9BY42 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 AC003102.2-201ENST00000589195 1469 ntBASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 TLE1P1-201ENST00000422965 589 ntBASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 AL157407.1-201ENST00000435784 904 ntBASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 RN7SL67P-201ENST00000492147 296 ntBASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RTFDC1Q9BY42 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 FAM90A2P-201ENST00000511144 1395 ntBASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 FAM90A25P-201ENST00000528404 1395 ntBASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms