Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
ARID3AQ99856 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ARID3AQ99856 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ARID3AQ99856 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ARID3AQ99856 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.51■□□□□ 0.39
ARID3AQ99856 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.51■□□□□ 0.39
ARID3AQ99856 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 AC211486.1-202ENST00000416371 468 ntBASIC17.51■□□□□ 0.39
ARID3AQ99856 AL592309.1-201ENST00000443127 649 ntBASIC17.51■□□□□ 0.39
ARID3AQ99856 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.51■□□□□ 0.39
ARID3AQ99856 AC211476.1-201ENST00000503899 468 ntBASIC17.51■□□□□ 0.39
ARID3AQ99856 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
ARID3AQ99856 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.51■□□□□ 0.39
ARID3AQ99856 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC17.51■□□□□ 0.39
ARID3AQ99856 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.51■□□□□ 0.39
ARID3AQ99856 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.51■□□□□ 0.39
ARID3AQ99856 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.51■□□□□ 0.39
ARID3AQ99856 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.51■□□□□ 0.39
ARID3AQ99856 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.51■□□□□ 0.39
ARID3AQ99856 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
ARID3AQ99856 AC134684.3-201ENST00000641758 218 ntBASIC17.51■□□□□ 0.39
ARID3AQ99856 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.51■□□□□ 0.39
ARID3AQ99856 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
ARID3AQ99856 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
ARID3AQ99856 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
ARID3AQ99856 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.5■□□□□ 0.39
ARID3AQ99856 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.5■□□□□ 0.39
ARID3AQ99856 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC17.5■□□□□ 0.39
ARID3AQ99856 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC17.5■□□□□ 0.39
ARID3AQ99856 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
ARID3AQ99856 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
ARID3AQ99856 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.5■□□□□ 0.39
ARID3AQ99856 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.5■□□□□ 0.39
ARID3AQ99856 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.5■□□□□ 0.39
ARID3AQ99856 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.5■□□□□ 0.39
ARID3AQ99856 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ARID3AQ99856 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.5■□□□□ 0.39
ARID3AQ99856 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
ARID3AQ99856 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 SLC25A39P2-201ENST00000537614 270 ntBASIC17.5■□□□□ 0.39
ARID3AQ99856 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.5■□□□□ 0.39
ARID3AQ99856 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.5■□□□□ 0.39
ARID3AQ99856 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC17.5■□□□□ 0.39
ARID3AQ99856 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.5■□□□□ 0.39
ARID3AQ99856 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.5■□□□□ 0.39
ARID3AQ99856 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.5■□□□□ 0.39
ARID3AQ99856 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
ARID3AQ99856 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ARID3AQ99856 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ARID3AQ99856 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ARID3AQ99856 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARID3AQ99856 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARID3AQ99856 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARID3AQ99856 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.49■□□□□ 0.39
ARID3AQ99856 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ARID3AQ99856 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARID3AQ99856 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC17.49■□□□□ 0.39
ARID3AQ99856 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARID3AQ99856 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.49■□□□□ 0.39
ARID3AQ99856 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ARID3AQ99856 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.49■□□□□ 0.39
ARID3AQ99856 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARID3AQ99856 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARID3AQ99856 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARID3AQ99856 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ARID3AQ99856 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ARID3AQ99856 MIR346-201ENST00000362234 95 ntBASIC17.49■□□□□ 0.39
ARID3AQ99856 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.49■□□□□ 0.39
ARID3AQ99856 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.49■□□□□ 0.39
ARID3AQ99856 FAM58DP-201ENST00000428076 619 ntBASIC17.49■□□□□ 0.39
ARID3AQ99856 AC004967.1-201ENST00000453589 447 ntBASIC17.49■□□□□ 0.39
ARID3AQ99856 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.49■□□□□ 0.39
ARID3AQ99856 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.49■□□□□ 0.39
ARID3AQ99856 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms