Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
S1PR3Q99500 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
S1PR3Q99500 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 MIR770-201ENST00000390219 98 ntBASIC12.64□□□□□ -0.39
S1PR3Q99500 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.64□□□□□ -0.39
S1PR3Q99500 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.64□□□□□ -0.39
S1PR3Q99500 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.64□□□□□ -0.39
S1PR3Q99500 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.64□□□□□ -0.39
S1PR3Q99500 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.64□□□□□ -0.39
S1PR3Q99500 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
S1PR3Q99500 TSSK5P-201ENST00000423978 907 ntBASIC12.64□□□□□ -0.39
S1PR3Q99500 FAM8A3P-201ENST00000427218 844 ntBASIC12.64□□□□□ -0.39
S1PR3Q99500 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC12.64□□□□□ -0.39
S1PR3Q99500 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.64□□□□□ -0.39
S1PR3Q99500 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.64□□□□□ -0.39
S1PR3Q99500 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
S1PR3Q99500 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
S1PR3Q99500 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.64□□□□□ -0.39
S1PR3Q99500 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 AC011467.4-201ENST00000594891 528 ntBASIC12.64□□□□□ -0.39
S1PR3Q99500 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 AL009178.2-201ENST00000597278 2719 ntBASIC12.64□□□□□ -0.39
S1PR3Q99500 BTBD7P1-201ENST00000447253 1453 ntBASIC12.64□□□□□ -0.39
S1PR3Q99500 AC012508.2-201ENST00000567613 1472 ntBASIC12.64□□□□□ -0.39
S1PR3Q99500 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.64□□□□□ -0.39
S1PR3Q99500 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
S1PR3Q99500 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
S1PR3Q99500 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
S1PR3Q99500 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.64□□□□□ -0.39
S1PR3Q99500 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
S1PR3Q99500 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.64□□□□□ -0.39
S1PR3Q99500 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.63□□□□□ -0.39
S1PR3Q99500 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC12.63□□□□□ -0.39
S1PR3Q99500 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 AC092053.3-201ENST00000641308 4975 ntBASIC12.63□□□□□ -0.39
S1PR3Q99500 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 AJ011931.1-201ENST00000618749 2492 ntBASIC12.63□□□□□ -0.39
S1PR3Q99500 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
S1PR3Q99500 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.63□□□□□ -0.39
S1PR3Q99500 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
S1PR3Q99500 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.63□□□□□ -0.39
S1PR3Q99500 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.63□□□□□ -0.39
S1PR3Q99500 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC12.63□□□□□ -0.39
S1PR3Q99500 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.63□□□□□ -0.39
S1PR3Q99500 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.63□□□□□ -0.39
S1PR3Q99500 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.63□□□□□ -0.39
S1PR3Q99500 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.63□□□□□ -0.39
S1PR3Q99500 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC12.63□□□□□ -0.39
S1PR3Q99500 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.63□□□□□ -0.39
S1PR3Q99500 AC044860.1-202ENST00000559481 777 ntBASIC12.63□□□□□ -0.39
S1PR3Q99500 AC025181.2-201ENST00000606994 802 ntBASIC12.63□□□□□ -0.39
S1PR3Q99500 AC004461.2-201ENST00000629517 803 ntBASIC12.63□□□□□ -0.39
S1PR3Q99500 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
S1PR3Q99500 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.63□□□□□ -0.39
S1PR3Q99500 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
S1PR3Q99500 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms