Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.77■□□□□ 0.11
CDK5RAP1Q96SZ6 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.77■□□□□ 0.11
CDK5RAP1Q96SZ6 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.77■□□□□ 0.11
CDK5RAP1Q96SZ6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.77■□□□□ 0.11
CDK5RAP1Q96SZ6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDK5RAP1Q96SZ6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDK5RAP1Q96SZ6 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDK5RAP1Q96SZ6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 AL137783.1-201ENST00000623494 1896 ntBASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 MIR1202-201ENST00000408529 83 ntBASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 AL355994.2-201ENST00000447882 704 ntBASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 NORAD-201ENST00000565493 5339 ntBASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.76■□□□□ 0.11
CDK5RAP1Q96SZ6 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 AC007274.1-201ENST00000439805 662 ntBASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 MESTP3-201ENST00000503460 968 ntBASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 AC026434.2-201ENST00000506094 1078 ntBASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms