Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 TCAF1P1-201ENST00000414990 2232 ntBASIC11.62□□□□□ -0.55
AP1S3Q96PC3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC11.62□□□□□ -0.55
AP1S3Q96PC3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 AL589702.1-201ENST00000641229 1509 ntBASIC11.61□□□□□ -0.55
AP1S3Q96PC3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 AC243562.2-201ENST00000561247 970 ntBASIC11.61□□□□□ -0.55
AP1S3Q96PC3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 OR7E47P-204ENST00000575924 449 ntBASIC11.61□□□□□ -0.55
AP1S3Q96PC3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 CSPG4P12-201ENST00000558282 4853 ntBASIC11.61□□□□□ -0.55
AP1S3Q96PC3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 CCBE1-202ENST00000439986 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
AP1S3Q96PC3 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 DGCR9-201ENST00000609630 2415 ntBASIC11.6□□□□□ -0.55
AP1S3Q96PC3 BTBD9-201ENST00000314100 8486 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 Z82170.1-201ENST00000625081 3192 ntBASIC11.6□□□□□ -0.55
AP1S3Q96PC3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 AC112693.3-201ENST00000624819 1983 ntBASIC11.6□□□□□ -0.55
AP1S3Q96PC3 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 AC073439.1-201ENST00000624121 1774 ntBASIC11.6□□□□□ -0.55
AP1S3Q96PC3 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 MROH4P-201ENST00000431302 1578 ntBASIC11.6□□□□□ -0.55
AP1S3Q96PC3 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.6□□□□□ -0.55
AP1S3Q96PC3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms