Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF31Q96EP0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF31Q96EP0 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF31Q96EP0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF31Q96EP0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF31Q96EP0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF31Q96EP0 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF31Q96EP0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
RNF31Q96EP0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNF31Q96EP0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 AC012441.1-201ENST00000446669 685 ntBASIC14.76□□□□□ -0.05
RNF31Q96EP0 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.76□□□□□ -0.05
RNF31Q96EP0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 CICP4-201ENST00000447359 2812 ntBASIC14.76□□□□□ -0.05
RNF31Q96EP0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF31Q96EP0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF31Q96EP0 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 AL603832.2-201ENST00000566195 2125 ntBASIC14.75□□□□□ -0.05
RNF31Q96EP0 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 BOLA2P3-201ENST00000404566 256 ntBASIC14.75□□□□□ -0.05
RNF31Q96EP0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 RPL7P3-201ENST00000441388 714 ntBASIC14.75□□□□□ -0.05
RNF31Q96EP0 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 RPL13AP25-201ENST00000484130 612 ntBASIC14.75□□□□□ -0.05
RNF31Q96EP0 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.75□□□□□ -0.05
RNF31Q96EP0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF31Q96EP0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.75□□□□□ -0.05
RNF31Q96EP0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms