Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 AC023157.3-201ENST00000619086 2088 ntBASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SH3KBP1Q96B97 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 AC112492.5-201ENST00000421897 457 ntBASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 TDH-203ENST00000531764 1110 ntBASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 HILS1-202ENST00000545329 423 ntBASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 AC233724.13-201ENST00000598383 410 ntBASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.15■□□□□ 0.02
SH3KBP1Q96B97 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.14■□□□□ 0.02
SH3KBP1Q96B97 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 AC009090.5-201ENST00000624886 2285 ntBASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 AC026410.3-201ENST00000514280 936 ntBASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 AP001063.1-201ENST00000568332 529 ntBASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 AL022328.1-201ENST00000610050 478 ntBASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 AC138035.3-201ENST00000622706 2791 ntBASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 AL109954.1-202ENST00000564051 2148 ntBASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.14■□□□□ 0.01
SH3KBP1Q96B97 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SH3KBP1Q96B97 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms