Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NUP35Q8NFH5 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 PCED1CP-201ENST00000419887 785 ntBASIC11.43□□□□□ -0.58
NUP35Q8NFH5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 AC022447.6-201ENST00000515522 438 ntBASIC11.43□□□□□ -0.58
NUP35Q8NFH5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 OR7E14P-202ENST00000530490 1290 ntBASIC11.43□□□□□ -0.58
NUP35Q8NFH5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 AL356488.2-201ENST00000602755 427 ntBASIC11.43□□□□□ -0.58
NUP35Q8NFH5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 SPTSSB-204ENST00000617024 1292 ntBASIC11.43□□□□□ -0.58
NUP35Q8NFH5 AC005593.1-201ENST00000624894 515 ntBASIC11.43□□□□□ -0.58
NUP35Q8NFH5 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 CR383656.2-201ENST00000548656 2254 ntBASIC11.43□□□□□ -0.58
NUP35Q8NFH5 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NUP35Q8NFH5 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 IER3-202ENST00000376377 1350 ntBASIC11.42□□□□□ -0.58
NUP35Q8NFH5 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 AC019294.4-201ENST00000561777 2905 ntBASIC11.42□□□□□ -0.58
NUP35Q8NFH5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
NUP35Q8NFH5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms