Protein–RNA interactions for Protein: Q8N6N3

C1orf52, UPF0690 protein C1orf52, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf52Q8N6N3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
C1orf52Q8N6N3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.62□□□□□ -0.07
C1orf52Q8N6N3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
C1orf52Q8N6N3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.62□□□□□ -0.07
C1orf52Q8N6N3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 VDAC1P7-201ENST00000462417 847 ntBASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 CYMP-203ENST00000474680 1263 ntBASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
C1orf52Q8N6N3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 AC023908.3-201ENST00000564211 3047 ntBASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 AC026410.3-201ENST00000514280 936 ntBASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 AL662799.1-202ENST00000614205 422 ntBASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 AC018529.2-202ENST00000611482 3087 ntBASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.6□□□□□ -0.07
C1orf52Q8N6N3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms