Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 IGHV1-12-201ENST00000518307 205 ntBASIC20.9■□□□□ 0.94
UBR1Q8IWV7 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 NAA40-205ENST00000539656 577 ntTSL 4 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
UBR1Q8IWV7 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
UBR1Q8IWV7 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 ZNF436-AS1-201ENST00000335648 2547 ntBASIC20.89■□□□□ 0.93
UBR1Q8IWV7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 CTBP2P8-201ENST00000422584 1330 ntBASIC20.89■□□□□ 0.93
UBR1Q8IWV7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 NME4-203ENST00000397722 1232 ntTSL 2 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 GAS5-209ENST00000430245 723 ntTSL 3 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 CSNK1G2P1-201ENST00000442675 955 ntBASIC20.89■□□□□ 0.93
UBR1Q8IWV7 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 AC026470.1-201ENST00000478038 846 ntBASIC20.89■□□□□ 0.93
UBR1Q8IWV7 OR5BD1P-201ENST00000532527 817 ntBASIC20.89■□□□□ 0.93
UBR1Q8IWV7 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 TRMT112P3-201ENST00000580149 358 ntBASIC20.89■□□□□ 0.93
UBR1Q8IWV7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 AC007250.1-201ENST00000608934 338 ntBASIC20.89■□□□□ 0.93
UBR1Q8IWV7 PLS3-210ENST00000626746 216 ntTSL 4 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC20.89■□□□□ 0.93
UBR1Q8IWV7 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 DKFZP434H168-201ENST00000567381 1905 ntBASIC20.88■□□□□ 0.93
UBR1Q8IWV7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 MROH4P-201ENST00000431302 1578 ntBASIC20.88■□□□□ 0.93
UBR1Q8IWV7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 SCARNA12-201ENST00000459155 270 ntBASIC20.88■□□□□ 0.93
UBR1Q8IWV7 FAM86B3P-203ENST00000523992 854 ntBASIC20.88■□□□□ 0.93
UBR1Q8IWV7 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 AL136172.1-201ENST00000598590 1394 ntBASIC20.88■□□□□ 0.93
UBR1Q8IWV7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
UBR1Q8IWV7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 OR2A1-AS1-210ENST00000496968 531 ntBASIC20.87■□□□□ 0.93
UBR1Q8IWV7 AP005264.6-204ENST00000588436 719 ntBASIC20.87■□□□□ 0.93
UBR1Q8IWV7 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 AC018695.6-201ENST00000614011 534 ntBASIC20.87■□□□□ 0.93
UBR1Q8IWV7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.87■□□□□ 0.93
UBR1Q8IWV7 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms