Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 MIR943-201ENST00000401286 94 ntBASIC13.64□□□□□ -0.23
LRRC28Q86X40 AC055876.3-201ENST00000431496 288 ntBASIC13.64□□□□□ -0.23
LRRC28Q86X40 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.64□□□□□ -0.23
LRRC28Q86X40 AC069120.2-201ENST00000524091 540 ntBASIC13.64□□□□□ -0.23
LRRC28Q86X40 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 AC138649.4-201ENST00000612222 287 ntBASIC13.64□□□□□ -0.23
LRRC28Q86X40 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.64□□□□□ -0.23
LRRC28Q86X40 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LRRC28Q86X40 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 AC097359.2-201ENST00000604992 2389 ntBASIC13.63□□□□□ -0.23
LRRC28Q86X40 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 RPL5P21-201ENST00000404620 815 ntBASIC13.63□□□□□ -0.23
LRRC28Q86X40 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 AL158211.3-201ENST00000607385 239 ntBASIC13.63□□□□□ -0.23
LRRC28Q86X40 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.63□□□□□ -0.23
LRRC28Q86X40 MTHFR-210ENST00000641407 2387 ntBASIC13.63□□□□□ -0.23
LRRC28Q86X40 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LRRC28Q86X40 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 BNIP3P1-202ENST00000550043 1585 ntBASIC13.62□□□□□ -0.23
LRRC28Q86X40 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LRRC28Q86X40 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.62□□□□□ -0.23
LRRC28Q86X40 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms