Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 RBPMS2P1-201ENST00000437762 623 ntBASIC13.84□□□□□ -0.19
SHFQ7M4L6 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 AP000344.2-201ENST00000512987 629 ntBASIC13.84□□□□□ -0.19
SHFQ7M4L6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 BANF1P1-201ENST00000553684 263 ntBASIC13.84□□□□□ -0.19
SHFQ7M4L6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 AL122018.1-201ENST00000446607 2310 ntBASIC13.84□□□□□ -0.19
SHFQ7M4L6 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SHFQ7M4L6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SHFQ7M4L6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.83□□□□□ -0.19
SHFQ7M4L6 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
SHFQ7M4L6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SHFQ7M4L6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 AC004461.1-201ENST00000412461 403 ntBASIC13.83□□□□□ -0.2
SHFQ7M4L6 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 FAM58DP-201ENST00000428076 619 ntBASIC13.83□□□□□ -0.2
SHFQ7M4L6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 HIST3H2BA-201ENST00000436555 524 ntBASIC13.83□□□□□ -0.2
SHFQ7M4L6 TARDBPP1-201ENST00000442013 1203 ntBASIC13.83□□□□□ -0.2
SHFQ7M4L6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 YBX1P5-201ENST00000509441 847 ntBASIC13.83□□□□□ -0.2
SHFQ7M4L6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 AC004835.2-201ENST00000603762 682 ntBASIC13.83□□□□□ -0.2
SHFQ7M4L6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 REXO1L4P-201ENST00000605109 1937 ntBASIC13.83□□□□□ -0.2
SHFQ7M4L6 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 AC136759.1-202ENST00000530858 2194 ntBASIC13.83□□□□□ -0.2
SHFQ7M4L6 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SHFQ7M4L6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.83□□□□□ -0.2
SHFQ7M4L6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms