Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 RNA5SP412-201ENST00000516234 123 ntBASIC18.06■□□□□ 0.48
CTR9Q6PD62 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 AC006453.4-201ENST00000636949 1252 ntBASIC18.06■□□□□ 0.48
CTR9Q6PD62 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTR9Q6PD62 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CTR9Q6PD62 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 AL137783.1-201ENST00000623494 1896 ntBASIC18.05■□□□□ 0.48
CTR9Q6PD62 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 CD8B2-202ENST00000417670 633 ntBASIC18.05■□□□□ 0.48
CTR9Q6PD62 POM121L8P-201ENST00000417732 1281 ntBASIC18.05■□□□□ 0.48
CTR9Q6PD62 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 POM121L9P-203ENST00000441984 1285 ntBASIC18.05■□□□□ 0.48
CTR9Q6PD62 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 AC138035.3-201ENST00000622706 2791 ntBASIC18.05■□□□□ 0.48
CTR9Q6PD62 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTR9Q6PD62 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.05■□□□□ 0.48
CTR9Q6PD62 AC013268.4-201ENST00000637413 2228 ntBASIC18.04■□□□□ 0.48
CTR9Q6PD62 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 AC073347.1-201ENST00000421633 2643 ntBASIC18.04■□□□□ 0.48
CTR9Q6PD62 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 REXO1L6P-201ENST00000603433 1515 ntBASIC18.04■□□□□ 0.48
CTR9Q6PD62 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 REXO1L2P-201ENST00000425429 2069 ntBASIC18.04■□□□□ 0.48
CTR9Q6PD62 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 TPM3P8-201ENST00000330554 643 ntBASIC18.04■□□□□ 0.48
CTR9Q6PD62 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 MIR1202-201ENST00000408529 83 ntBASIC18.04■□□□□ 0.48
CTR9Q6PD62 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 AC026434.2-201ENST00000506094 1078 ntBASIC18.04■□□□□ 0.48
CTR9Q6PD62 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.04■□□□□ 0.48
CTR9Q6PD62 AL603764.1-201ENST00000636452 321 ntBASIC18.04■□□□□ 0.48
CTR9Q6PD62 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTR9Q6PD62 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms