Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 RN7SL725P-201ENST00000606439 259 ntBASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LYSMD4Q5XG99 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 AC006058.4-201ENST00000624016 1670 ntBASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 AC239868.1-201ENST00000369385 493 ntBASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 KLF2P1-201ENST00000447438 1042 ntBASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 RN7SL8P-201ENST00000461771 266 ntBASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 PGAM1P5-201ENST00000548011 764 ntBASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.78□□□□□ -0.04
LYSMD4Q5XG99 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 AL603832.2-201ENST00000566195 2125 ntBASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LYSMD4Q5XG99 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 SCARNA21-201ENST00000517026 139 ntBASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 NPM1P43-201ENST00000558669 786 ntBASIC14.77□□□□□ -0.05
LYSMD4Q5XG99 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms