Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
PCDH1Q08174 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDH1Q08174 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDH1Q08174 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDH1Q08174 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDH1Q08174 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDH1Q08174 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.72□□□□□ -0.05
PCDH1Q08174 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDH1Q08174 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.72□□□□□ -0.05
PCDH1Q08174 DUX4L47-201ENST00000566374 394 ntBASIC14.72□□□□□ -0.05
PCDH1Q08174 AC124283.3-201ENST00000570869 594 ntBASIC14.72□□□□□ -0.05
PCDH1Q08174 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
PCDH1Q08174 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.72□□□□□ -0.05
PCDH1Q08174 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDH1Q08174 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDH1Q08174 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDH1Q08174 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDH1Q08174 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
PCDH1Q08174 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDH1Q08174 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
PCDH1Q08174 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDH1Q08174 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
PCDH1Q08174 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDH1Q08174 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
PCDH1Q08174 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 AC134915.1-201ENST00000426461 574 ntBASIC14.71□□□□□ -0.05
PCDH1Q08174 HMGN1P19-201ENST00000436976 333 ntBASIC14.71□□□□□ -0.05
PCDH1Q08174 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDH1Q08174 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 SERBP1P5-201ENST00000510079 1181 ntBASIC14.71□□□□□ -0.05
PCDH1Q08174 AC104596.2-201ENST00000512793 793 ntBASIC14.71□□□□□ -0.05
PCDH1Q08174 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.71□□□□□ -0.05
PCDH1Q08174 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDH1Q08174 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDH1Q08174 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDH1Q08174 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDH1Q08174 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.71□□□□□ -0.05
PCDH1Q08174 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDH1Q08174 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDH1Q08174 AL096865.1-201ENST00000606796 927 ntBASIC14.71□□□□□ -0.05
PCDH1Q08174 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.71□□□□□ -0.05
PCDH1Q08174 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDH1Q08174 AC007431.3-201ENST00000623221 587 ntBASIC14.71□□□□□ -0.05
PCDH1Q08174 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 KRT8P22-201ENST00000562317 1415 ntBASIC14.71□□□□□ -0.05
PCDH1Q08174 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.71□□□□□ -0.05
PCDH1Q08174 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.71□□□□□ -0.05
PCDH1Q08174 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PCDH1Q08174 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDH1Q08174 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCDH1Q08174 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.71□□□□□ -0.06
PCDH1Q08174 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.71□□□□□ -0.06
PCDH1Q08174 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.71□□□□□ -0.06
PCDH1Q08174 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.71□□□□□ -0.06
PCDH1Q08174 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PCDH1Q08174 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.06
PCDH1Q08174 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PCDH1Q08174 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDH1Q08174 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.7□□□□□ -0.06
PCDH1Q08174 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDH1Q08174 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDH1Q08174 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDH1Q08174 AC087499.6-201ENST00000411576 835 ntBASIC14.7□□□□□ -0.06
PCDH1Q08174 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.7□□□□□ -0.06
PCDH1Q08174 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PCDH1Q08174 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PCDH1Q08174 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDH1Q08174 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.7□□□□□ -0.06
PCDH1Q08174 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PCDH1Q08174 AL589935.2-201ENST00000616471 1231 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms