Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.73□□□□□ -0.05
HMGCS1Q01581 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 LILRP1-201ENST00000444199 1370 ntBASIC14.73□□□□□ -0.05
HMGCS1Q01581 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HMGCS1Q01581 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 AC055876.3-201ENST00000431496 288 ntBASIC14.72□□□□□ -0.05
HMGCS1Q01581 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 AC135586.1-201ENST00000539323 574 ntBASIC14.72□□□□□ -0.05
HMGCS1Q01581 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 AC138649.4-201ENST00000612222 287 ntBASIC14.72□□□□□ -0.05
HMGCS1Q01581 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 AC004840.1-201ENST00000636359 365 ntBASIC14.72□□□□□ -0.05
HMGCS1Q01581 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 AC007787.1-201ENST00000588095 1583 ntBASIC14.72□□□□□ -0.05
HMGCS1Q01581 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HMGCS1Q01581 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCS1Q01581 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 AC097359.2-201ENST00000604992 2389 ntBASIC14.71□□□□□ -0.05
HMGCS1Q01581 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 BTBD7P1-201ENST00000447253 1453 ntBASIC14.71□□□□□ -0.05
HMGCS1Q01581 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 AC018442.1-201ENST00000421439 2061 ntBASIC14.71□□□□□ -0.05
HMGCS1Q01581 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 SRD5A3P1-201ENST00000603021 949 ntBASIC14.71□□□□□ -0.05
HMGCS1Q01581 AL391069.4-201ENST00000609583 481 ntBASIC14.71□□□□□ -0.05
HMGCS1Q01581 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGCS1Q01581 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCS1Q01581 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCS1Q01581 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCS1Q01581 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCS1Q01581 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms