Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
SMIM11AP58511 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.08□□□□□ -0.15
SMIM11AP58511 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.08□□□□□ -0.15
SMIM11AP58511 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SMIM11AP58511 AC139749.1-202ENST00000617529 3139 ntBASIC14.08□□□□□ -0.15
SMIM11AP58511 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
SMIM11AP58511 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM11AP58511 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM11AP58511 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM11AP58511 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
SMIM11AP58511 AC015656.1-201ENST00000624209 3578 ntBASIC14.08□□□□□ -0.15
SMIM11AP58511 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM11AP58511 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SMIM11AP58511 AC015802.1-201ENST00000588104 1449 ntBASIC14.08□□□□□ -0.15
SMIM11AP58511 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 DMBT1P1-203ENST00000636837 4628 ntBASIC14.08□□□□□ -0.16
SMIM11AP58511 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
SMIM11AP58511 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 GPS2P2-201ENST00000430745 888 ntBASIC14.08□□□□□ -0.16
SMIM11AP58511 KRT18P64-201ENST00000434946 1219 ntBASIC14.08□□□□□ -0.16
SMIM11AP58511 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.08□□□□□ -0.16
SMIM11AP58511 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.08□□□□□ -0.16
SMIM11AP58511 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.08□□□□□ -0.16
SMIM11AP58511 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SMIM11AP58511 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.08□□□□□ -0.16
SMIM11AP58511 SAMD11P1-201ENST00000571429 661 ntBASIC14.08□□□□□ -0.16
SMIM11AP58511 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 MIR6080-201ENST00000617359 66 ntBASIC14.08□□□□□ -0.16
SMIM11AP58511 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.08□□□□□ -0.16
SMIM11AP58511 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.08□□□□□ -0.16
SMIM11AP58511 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.08□□□□□ -0.16
SMIM11AP58511 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SMIM11AP58511 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 PEG13-201ENST00000631594 5667 ntBASIC14.08□□□□□ -0.16
SMIM11AP58511 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.08□□□□□ -0.16
SMIM11AP58511 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.08□□□□□ -0.16
SMIM11AP58511 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SMIM11AP58511 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SMIM11AP58511 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM11AP58511 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM11AP58511 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM11AP58511 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM11AP58511 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.07□□□□□ -0.16
SMIM11AP58511 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
SMIM11AP58511 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.07□□□□□ -0.16
SMIM11AP58511 AL080243.2-201ENST00000418783 582 ntBASIC14.07□□□□□ -0.16
SMIM11AP58511 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM11AP58511 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM11AP58511 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SMIM11AP58511 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.07□□□□□ -0.16
SMIM11AP58511 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms