Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.99□□□□□ -0.01
CLDN2P57739 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN2P57739 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN2P57739 FLJ16779-201ENST00000612722 7638 ntBASIC14.99□□□□□ -0.01
CLDN2P57739 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
CLDN2P57739 AC020658.6-201ENST00000623564 1870 ntBASIC14.99□□□□□ -0.01
CLDN2P57739 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN2P57739 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN2P57739 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN2P57739 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN2P57739 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN2P57739 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLDN2P57739 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.99□□□□□ -0.01
CLDN2P57739 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN2P57739 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN2P57739 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN2P57739 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 NFIC-211ENST00000641145 8399 ntBASIC14.98□□□□□ -0.01
CLDN2P57739 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
CLDN2P57739 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN2P57739 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 GHSR-202ENST00000427970 912 ntBASIC14.98□□□□□ -0.01
CLDN2P57739 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN2P57739 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN2P57739 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN2P57739 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.98□□□□□ -0.01
CLDN2P57739 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN2P57739 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN2P57739 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
CLDN2P57739 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.98□□□□□ -0.01
CLDN2P57739 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 AC138466.3-201ENST00000619983 221 ntBASIC14.98□□□□□ -0.01
CLDN2P57739 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.98□□□□□ -0.01
CLDN2P57739 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CLDN2P57739 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN2P57739 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN2P57739 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN2P57739 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN2P57739 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.98□□□□□ -0.01
CLDN2P57739 AC136621.1-201ENST00000624017 2304 ntBASIC14.98□□□□□ -0.01
CLDN2P57739 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLDN2P57739 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.98□□□□□ -0.01
CLDN2P57739 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLDN2P57739 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN2P57739 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN2P57739 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN2P57739 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN2P57739 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN2P57739 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.97□□□□□ -0.01
CLDN2P57739 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 TSPY26P-202ENST00000565928 3884 ntBASIC14.97□□□□□ -0.01
CLDN2P57739 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN2P57739 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.97□□□□□ -0.01
CLDN2P57739 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CLDN2P57739 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN2P57739 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN2P57739 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.97□□□□□ -0.01
CLDN2P57739 HSPB1P2-201ENST00000448722 546 ntBASIC14.97□□□□□ -0.01
CLDN2P57739 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.97□□□□□ -0.01
CLDN2P57739 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.97□□□□□ -0.01
CLDN2P57739 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 AL139099.5-201ENST00000635274 300 ntBASIC14.97□□□□□ -0.01
CLDN2P57739 AL603764.1-201ENST00000636452 321 ntBASIC14.97□□□□□ -0.01
CLDN2P57739 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLDN2P57739 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLDN2P57739 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms