Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDH13P55290 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH13P55290 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CDH13P55290 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH13P55290 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH13P55290 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH13P55290 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CDH13P55290 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH13P55290 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH13P55290 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH13P55290 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CDH13P55290 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH13P55290 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDH13P55290 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH13P55290 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDH13P55290 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH13P55290 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.95□□□□□ -0.02
CDH13P55290 MIR1233-2-201ENST00000408138 82 ntBASIC14.95□□□□□ -0.02
CDH13P55290 MIR1233-1-201ENST00000408722 82 ntBASIC14.95□□□□□ -0.02
CDH13P55290 TREML5P-201ENST00000421694 576 ntBASIC14.95□□□□□ -0.02
CDH13P55290 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.95□□□□□ -0.02
CDH13P55290 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.95□□□□□ -0.02
CDH13P55290 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH13P55290 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH13P55290 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDH13P55290 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH13P55290 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH13P55290 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CDH13P55290 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
CDH13P55290 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH13P55290 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.95□□□□□ -0.02
CDH13P55290 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH13P55290 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH13P55290 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDH13P55290 AL691403.2-201ENST00000618460 490 ntBASIC14.95□□□□□ -0.02
CDH13P55290 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH13P55290 AC093028.1-201ENST00000622998 982 ntBASIC14.95□□□□□ -0.02
CDH13P55290 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CDH13P55290 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH13P55290 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH13P55290 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH13P55290 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH13P55290 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH13P55290 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH13P55290 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CDH13P55290 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CDH13P55290 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 AC100757.3-201ENST00000622361 1406 ntBASIC14.94□□□□□ -0.02
CDH13P55290 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CDH13P55290 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH13P55290 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH13P55290 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CDH13P55290 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH13P55290 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH13P55290 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH13P55290 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.94□□□□□ -0.02
CDH13P55290 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH13P55290 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH13P55290 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CDH13P55290 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.94□□□□□ -0.02
CDH13P55290 SAMD11P1-201ENST00000571429 661 ntBASIC14.94□□□□□ -0.02
CDH13P55290 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.94□□□□□ -0.02
CDH13P55290 AC000095.1-201ENST00000603208 874 ntBASIC14.94□□□□□ -0.02
CDH13P55290 AL590560.3-201ENST00000623350 461 ntBASIC14.94□□□□□ -0.02
CDH13P55290 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.94□□□□□ -0.02
CDH13P55290 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CDH13P55290 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CDH13P55290 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms