Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CACNA2D1P54289 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CACNA2D1P54289 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CACNA2D1P54289 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CACNA2D1P54289 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CACNA2D1P54289 REXO1L5P-201ENST00000622260 2098 ntBASIC16.17■□□□□ 0.18
CACNA2D1P54289 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CACNA2D1P54289 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CACNA2D1P54289 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CACNA2D1P54289 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CACNA2D1P54289 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
CACNA2D1P54289 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CACNA2D1P54289 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CACNA2D1P54289 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 TMBIM7P-203ENST00000641617 1718 ntBASIC16.16■□□□□ 0.18
CACNA2D1P54289 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 KRT8P44-201ENST00000441609 1350 ntBASIC16.16■□□□□ 0.18
CACNA2D1P54289 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 REXO1L4P-201ENST00000605109 1937 ntBASIC16.16■□□□□ 0.18
CACNA2D1P54289 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 AL139094.1-201ENST00000405549 1188 ntBASIC16.16■□□□□ 0.18
CACNA2D1P54289 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 HLA-K-203ENST00000430151 1046 ntBASIC16.16■□□□□ 0.18
CACNA2D1P54289 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 COX11-210ENST00000639671 696 ntBASIC16.16■□□□□ 0.18
CACNA2D1P54289 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.16■□□□□ 0.18
CACNA2D1P54289 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CACNA2D1P54289 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 AC023024.2-201ENST00000623561 1993 ntBASIC16.15■□□□□ 0.18
CACNA2D1P54289 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.15■□□□□ 0.18
CACNA2D1P54289 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 ACTBP8-201ENST00000403258 1108 ntBASIC16.15■□□□□ 0.18
CACNA2D1P54289 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 GHSR-202ENST00000427970 912 ntBASIC16.15■□□□□ 0.18
CACNA2D1P54289 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 AC104989.1-201ENST00000519711 778 ntBASIC16.15■□□□□ 0.18
CACNA2D1P54289 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 KRT90P-201ENST00000549264 1064 ntBASIC16.15■□□□□ 0.18
CACNA2D1P54289 AC025279.2-201ENST00000569730 653 ntBASIC16.15■□□□□ 0.18
CACNA2D1P54289 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.15■□□□□ 0.18
CACNA2D1P54289 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CACNA2D1P54289 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms