Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 DRD5P1-201ENST00000456605 1438 ntBASIC13.54□□□□□ -0.24
SLC25A1P53007 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SLC25A1P53007 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SLC25A1P53007 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.53□□□□□ -0.24
SLC25A1P53007 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.53□□□□□ -0.24
SLC25A1P53007 AC055811.4-201ENST00000624039 1754 ntBASIC13.53□□□□□ -0.24
SLC25A1P53007 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
SLC25A1P53007 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
SLC25A1P53007 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 TREML5P-201ENST00000421694 576 ntBASIC13.53□□□□□ -0.24
SLC25A1P53007 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.53□□□□□ -0.24
SLC25A1P53007 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.53□□□□□ -0.24
SLC25A1P53007 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.53□□□□□ -0.24
SLC25A1P53007 AC026410.3-201ENST00000514280 936 ntBASIC13.53□□□□□ -0.24
SLC25A1P53007 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
SLC25A1P53007 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.53□□□□□ -0.24
SLC25A1P53007 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.53□□□□□ -0.24
SLC25A1P53007 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SLC25A1P53007 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 CLK3P2-201ENST00000427566 1453 ntBASIC13.53□□□□□ -0.24
SLC25A1P53007 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 AL158070.2-201ENST00000623713 1621 ntBASIC13.53□□□□□ -0.24
SLC25A1P53007 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
SLC25A1P53007 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SLC25A1P53007 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.53□□□□□ -0.24
SLC25A1P53007 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC25A1P53007 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
SLC25A1P53007 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC25A1P53007 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
SLC25A1P53007 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.52□□□□□ -0.24
SLC25A1P53007 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC25A1P53007 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.52□□□□□ -0.24
SLC25A1P53007 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.52□□□□□ -0.24
SLC25A1P53007 AC097359.2-201ENST00000604992 2389 ntBASIC13.52□□□□□ -0.24
SLC25A1P53007 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC25A1P53007 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.52□□□□□ -0.24
SLC25A1P53007 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
SLC25A1P53007 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC25A1P53007 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SLC25A1P53007 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SLC25A1P53007 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.52□□□□□ -0.25
SLC25A1P53007 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC25A1P53007 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SLC25A1P53007 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.52□□□□□ -0.25
SLC25A1P53007 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.52□□□□□ -0.25
SLC25A1P53007 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC25A1P53007 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC25A1P53007 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC25A1P53007 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.52□□□□□ -0.25
SLC25A1P53007 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.52□□□□□ -0.25
SLC25A1P53007 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.52□□□□□ -0.25
SLC25A1P53007 AC009407.1-201ENST00000568958 598 ntBASIC13.52□□□□□ -0.25
SLC25A1P53007 AC036164.1-201ENST00000570544 333 ntBASIC13.52□□□□□ -0.25
SLC25A1P53007 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.52□□□□□ -0.25
SLC25A1P53007 SRD5A3P1-201ENST00000603021 949 ntBASIC13.52□□□□□ -0.25
SLC25A1P53007 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.52□□□□□ -0.25
SLC25A1P53007 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC25A1P53007 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC25A1P53007 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SLC25A1P53007 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SLC25A1P53007 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.52□□□□□ -0.25
SLC25A1P53007 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms