Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
GDNFP39905 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.35□□□□□ -0.27
GDNFP39905 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GDNFP39905 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.35□□□□□ -0.27
GDNFP39905 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 AC004461.1-201ENST00000412461 403 ntBASIC13.35□□□□□ -0.27
GDNFP39905 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
GDNFP39905 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 IGHV3-62-201ENST00000520057 340 ntBASIC13.35□□□□□ -0.27
GDNFP39905 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.35□□□□□ -0.27
GDNFP39905 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.35□□□□□ -0.27
GDNFP39905 AC093520.2-201ENST00000561830 333 ntBASIC13.35□□□□□ -0.27
GDNFP39905 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.35□□□□□ -0.27
GDNFP39905 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.35□□□□□ -0.27
GDNFP39905 MIR3687-2-201ENST00000577708 61 ntBASIC13.35□□□□□ -0.27
GDNFP39905 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 AC011467.4-201ENST00000594891 528 ntBASIC13.35□□□□□ -0.27
GDNFP39905 AL450472.2-201ENST00000603663 1156 ntBASIC13.35□□□□□ -0.27
GDNFP39905 MIR3687-1-201ENST00000614492 61 ntBASIC13.35□□□□□ -0.27
GDNFP39905 AC055717.3-201ENST00000622967 595 ntBASIC13.35□□□□□ -0.27
GDNFP39905 AL513210.1-201ENST00000629608 234 ntBASIC13.35□□□□□ -0.27
GDNFP39905 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GDNFP39905 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.35□□□□□ -0.27
GDNFP39905 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
GDNFP39905 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GDNFP39905 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GDNFP39905 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GDNFP39905 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDNFP39905 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
GDNFP39905 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDNFP39905 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.34□□□□□ -0.27
GDNFP39905 FAM58DP-201ENST00000428076 619 ntBASIC13.34□□□□□ -0.27
GDNFP39905 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.34□□□□□ -0.27
GDNFP39905 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.34□□□□□ -0.27
GDNFP39905 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.34□□□□□ -0.27
GDNFP39905 AC098859.1-201ENST00000502915 1238 ntBASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms