Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AJ011931.1-201ENST00000618749 2492 ntBASIC14.58□□□□□ -0.08
KRT20P35900 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT20P35900 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT20P35900 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
KRT20P35900 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.58□□□□□ -0.08
KRT20P35900 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
KRT20P35900 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT20P35900 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT20P35900 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
KRT20P35900 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
KRT20P35900 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT20P35900 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT20P35900 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT20P35900 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT20P35900 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT20P35900 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT20P35900 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 Z97205.2-201ENST00000564697 1639 ntBASIC14.57□□□□□ -0.08
KRT20P35900 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT20P35900 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
KRT20P35900 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT20P35900 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT20P35900 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT20P35900 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT20P35900 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT20P35900 AC044860.1-202ENST00000559481 777 ntBASIC14.57□□□□□ -0.08
KRT20P35900 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT20P35900 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT20P35900 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT20P35900 AC097359.3-201ENST00000603982 1210 ntBASIC14.57□□□□□ -0.08
KRT20P35900 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.57□□□□□ -0.08
KRT20P35900 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT20P35900 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT20P35900 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
KRT20P35900 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT20P35900 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT20P35900 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT20P35900 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT20P35900 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
KRT20P35900 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.57□□□□□ -0.08
KRT20P35900 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
KRT20P35900 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT20P35900 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.57□□□□□ -0.08
KRT20P35900 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.57□□□□□ -0.08
KRT20P35900 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
KRT20P35900 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.56□□□□□ -0.08
KRT20P35900 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.56□□□□□ -0.08
KRT20P35900 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
KRT20P35900 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.56□□□□□ -0.08
KRT20P35900 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
KRT20P35900 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.56□□□□□ -0.08
KRT20P35900 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.56□□□□□ -0.08
KRT20P35900 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.56□□□□□ -0.08
KRT20P35900 TSSK5P-201ENST00000423978 907 ntBASIC14.56□□□□□ -0.08
KRT20P35900 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.56□□□□□ -0.08
KRT20P35900 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.56□□□□□ -0.08
KRT20P35900 AC004890.2-204ENST00000481968 304 ntBASIC14.56□□□□□ -0.08
KRT20P35900 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
KRT20P35900 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.56□□□□□ -0.08
KRT20P35900 AC135586.1-201ENST00000539323 574 ntBASIC14.56□□□□□ -0.08
KRT20P35900 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms