Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.73■□□□□ 0.27
KRT9P35527 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
KRT9P35527 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
KRT9P35527 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.73■□□□□ 0.27
KRT9P35527 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 AC005840.4-201ENST00000541242 2494 ntBASIC16.72■□□□□ 0.27
KRT9P35527 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT9P35527 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
KRT9P35527 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.72■□□□□ 0.27
KRT9P35527 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.72■□□□□ 0.27
KRT9P35527 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT9P35527 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.72■□□□□ 0.27
KRT9P35527 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 AC025181.2-201ENST00000606994 802 ntBASIC16.72■□□□□ 0.27
KRT9P35527 AL645728.2-202ENST00000641679 227 ntBASIC16.72■□□□□ 0.27
KRT9P35527 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
KRT9P35527 OS9-204ENST00000389146 2091 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT9P35527 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT9P35527 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT9P35527 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.72■□□□□ 0.27
KRT9P35527 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT9P35527 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.72■□□□□ 0.27
KRT9P35527 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 AC027601.5-201ENST00000624065 2482 ntBASIC16.72■□□□□ 0.27
KRT9P35527 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
KRT9P35527 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
KRT9P35527 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
KRT9P35527 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 AC100757.3-201ENST00000622361 1406 ntBASIC16.71■□□□□ 0.27
KRT9P35527 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
KRT9P35527 AP001267.2-201ENST00000532619 2086 ntBASIC16.71■□□□□ 0.27
KRT9P35527 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT9P35527 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
KRT9P35527 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.71■□□□□ 0.27
KRT9P35527 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT9P35527 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
KRT9P35527 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
KRT9P35527 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.71■□□□□ 0.27
KRT9P35527 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT9P35527 AC104457.1-201ENST00000401024 814 ntBASIC16.71■□□□□ 0.27
KRT9P35527 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT9P35527 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT9P35527 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.71■□□□□ 0.27
KRT9P35527 AL590560.3-201ENST00000623350 461 ntBASIC16.71■□□□□ 0.27
KRT9P35527 AL109936.8-201ENST00000641772 604 ntBASIC16.71■□□□□ 0.27
KRT9P35527 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
KRT9P35527 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT9P35527 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
KRT9P35527 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.71■□□□□ 0.27
KRT9P35527 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms