Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 INTS4P2-202ENST00000614726 2019 ntBASIC13.69□□□□□ -0.22
HLA-DOBP13765 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.69□□□□□ -0.22
HLA-DOBP13765 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
HLA-DOBP13765 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 AL158070.2-201ENST00000623713 1621 ntBASIC13.68□□□□□ -0.22
HLA-DOBP13765 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 AL513477.1-201ENST00000602865 2407 ntBASIC13.68□□□□□ -0.22
HLA-DOBP13765 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.68□□□□□ -0.22
HLA-DOBP13765 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 AL353779.1-201ENST00000434793 351 ntBASIC13.68□□□□□ -0.22
HLA-DOBP13765 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 SBF1P1-201ENST00000444527 5631 ntBASIC13.68□□□□□ -0.22
HLA-DOBP13765 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HLA-DOBP13765 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HLA-DOBP13765 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 LINC01101-201ENST00000622953 1884 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 AL360270.3-201ENST00000609118 1348 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 AC093525.8-201ENST00000624099 1342 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 CICP14-201ENST00000629111 2732 ntBASIC13.67□□□□□ -0.22
HLA-DOBP13765 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
HLA-DOBP13765 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HLA-DOBP13765 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms