Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.09□□□□□ -0.15
BMP4P12644 RARRES2P9-201ENST00000565168 469 ntBASIC14.09□□□□□ -0.15
BMP4P12644 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.09□□□□□ -0.15
BMP4P12644 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.09□□□□□ -0.15
BMP4P12644 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.09□□□□□ -0.15
BMP4P12644 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
BMP4P12644 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.09□□□□□ -0.15
BMP4P12644 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.09□□□□□ -0.15
BMP4P12644 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.09□□□□□ -0.15
BMP4P12644 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
BMP4P12644 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.09□□□□□ -0.15
BMP4P12644 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
BMP4P12644 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 AC005562.1-201ENST00000583030 3219 ntBASIC14.09□□□□□ -0.15
BMP4P12644 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 AC097376.2-205ENST00000610159 5334 ntBASIC14.09□□□□□ -0.15
BMP4P12644 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.09□□□□□ -0.15
BMP4P12644 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BMP4P12644 AL035456.1-201ENST00000456064 1369 ntBASIC14.09□□□□□ -0.15
BMP4P12644 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.09□□□□□ -0.15
BMP4P12644 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BMP4P12644 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.08□□□□□ -0.15
BMP4P12644 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
BMP4P12644 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
BMP4P12644 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.08□□□□□ -0.15
BMP4P12644 Z82170.1-201ENST00000625081 3192 ntBASIC14.08□□□□□ -0.15
BMP4P12644 U82695.1-201ENST00000635752 1889 ntBASIC14.08□□□□□ -0.16
BMP4P12644 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.08□□□□□ -0.16
BMP4P12644 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.08□□□□□ -0.16
BMP4P12644 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
BMP4P12644 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
BMP4P12644 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.08□□□□□ -0.16
BMP4P12644 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.08□□□□□ -0.16
BMP4P12644 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.08□□□□□ -0.16
BMP4P12644 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.08□□□□□ -0.16
BMP4P12644 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 AC098859.1-201ENST00000502915 1238 ntBASIC14.08□□□□□ -0.16
BMP4P12644 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.08□□□□□ -0.16
BMP4P12644 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.08□□□□□ -0.16
BMP4P12644 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.08□□□□□ -0.16
BMP4P12644 AC003101.2-201ENST00000612557 442 ntBASIC14.08□□□□□ -0.16
BMP4P12644 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.08□□□□□ -0.16
BMP4P12644 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
BMP4P12644 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BMP4P12644 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
BMP4P12644 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.07□□□□□ -0.16
BMP4P12644 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms