Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMIGD3P0DMS9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 RPS2P32-201ENST00000439199 892 ntBASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 AL355864.2-201ENST00000447420 863 ntBASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 AC104989.1-201ENST00000519711 778 ntBASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 AC068587.3-201ENST00000526613 355 ntBASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 MIR4313-201ENST00000580760 101 ntBASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 AC007292.2-201ENST00000593524 1812 ntBASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.85□□□□□ -0.19
TMIGD3P0DMS9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 AGAP7P-201ENST00000582299 2062 ntBASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 AGAP14-201ENST00000624701 2060 ntBASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 KRT223P-202ENST00000449164 1292 ntBASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 AC015910.1-201ENST00000579400 975 ntBASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 LINC01101-201ENST00000622953 1884 ntBASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.84□□□□□ -0.19
TMIGD3P0DMS9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms