Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.34□□□□□ -0.27
SFTPBP07988 PEG13-201ENST00000631594 5667 ntBASIC13.34□□□□□ -0.27
SFTPBP07988 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SFTPBP07988 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
SFTPBP07988 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.34□□□□□ -0.27
SFTPBP07988 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 FO393414.2-201ENST00000405153 598 ntBASIC13.34□□□□□ -0.27
SFTPBP07988 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.34□□□□□ -0.27
SFTPBP07988 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SFTPBP07988 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.34□□□□□ -0.27
SFTPBP07988 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.34□□□□□ -0.27
SFTPBP07988 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.34□□□□□ -0.27
SFTPBP07988 MIR3197-201ENST00000582241 73 ntBASIC13.34□□□□□ -0.27
SFTPBP07988 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 AL138828.2-201ENST00000615812 383 ntBASIC13.34□□□□□ -0.27
SFTPBP07988 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
SFTPBP07988 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.34□□□□□ -0.27
SFTPBP07988 LINC00552-201ENST00000625151 2579 ntBASIC13.34□□□□□ -0.27
SFTPBP07988 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.34□□□□□ -0.27
SFTPBP07988 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SFTPBP07988 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.34□□□□□ -0.27
SFTPBP07988 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.34□□□□□ -0.27
SFTPBP07988 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.34□□□□□ -0.27
SFTPBP07988 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.34□□□□□ -0.27
SFTPBP07988 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SFTPBP07988 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SFTPBP07988 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SFTPBP07988 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SFTPBP07988 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SFTPBP07988 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.27
SFTPBP07988 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.33□□□□□ -0.27
SFTPBP07988 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.33□□□□□ -0.28
SFTPBP07988 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.33□□□□□ -0.28
SFTPBP07988 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTPBP07988 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.33□□□□□ -0.28
SFTPBP07988 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SFTPBP07988 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.33□□□□□ -0.28
SFTPBP07988 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.33□□□□□ -0.28
SFTPBP07988 AL512638.1-201ENST00000457493 794 ntBASIC13.33□□□□□ -0.28
SFTPBP07988 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTPBP07988 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.33□□□□□ -0.28
SFTPBP07988 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.33□□□□□ -0.28
SFTPBP07988 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SFTPBP07988 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SFTPBP07988 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SFTPBP07988 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.33□□□□□ -0.28
SFTPBP07988 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.33□□□□□ -0.28
SFTPBP07988 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.33□□□□□ -0.28
SFTPBP07988 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.33□□□□□ -0.28
SFTPBP07988 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 AC232323.1-201ENST00000540724 2099 ntBASIC13.33□□□□□ -0.28
SFTPBP07988 REXO1L5P-201ENST00000622260 2098 ntBASIC13.33□□□□□ -0.28
SFTPBP07988 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
SFTPBP07988 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SFTPBP07988 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms