Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA1P02647 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.67□□□□□ -0.22
APOA1P02647 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
APOA1P02647 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA1P02647 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
APOA1P02647 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA1P02647 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.67□□□□□ -0.22
APOA1P02647 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA1P02647 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA1P02647 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
APOA1P02647 AC130686.1-201ENST00000622936 2466 ntBASIC13.67□□□□□ -0.22
APOA1P02647 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC13.67□□□□□ -0.22
APOA1P02647 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA1P02647 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA1P02647 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
APOA1P02647 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.67□□□□□ -0.22
APOA1P02647 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.67□□□□□ -0.22
APOA1P02647 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
APOA1P02647 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
APOA1P02647 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.66□□□□□ -0.22
APOA1P02647 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.66□□□□□ -0.22
APOA1P02647 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
APOA1P02647 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 DUSP5P1-201ENST00000441325 1139 ntBASIC13.66□□□□□ -0.22
APOA1P02647 FAM86EP-206ENST00000510506 987 ntBASIC13.66□□□□□ -0.22
APOA1P02647 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.66□□□□□ -0.22
APOA1P02647 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.66□□□□□ -0.22
APOA1P02647 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
APOA1P02647 AC008667.4-201ENST00000607370 168 ntBASIC13.66□□□□□ -0.22
APOA1P02647 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.66□□□□□ -0.22
APOA1P02647 AL355877.3-201ENST00000622820 899 ntBASIC13.66□□□□□ -0.22
APOA1P02647 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.66□□□□□ -0.22
APOA1P02647 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 AP001267.2-201ENST00000532619 2086 ntBASIC13.66□□□□□ -0.22
APOA1P02647 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.66□□□□□ -0.22
APOA1P02647 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
APOA1P02647 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.66□□□□□ -0.22
APOA1P02647 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.66□□□□□ -0.22
APOA1P02647 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
APOA1P02647 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
APOA1P02647 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
APOA1P02647 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.65□□□□□ -0.22
APOA1P02647 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
APOA1P02647 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.65□□□□□ -0.22
APOA1P02647 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.65□□□□□ -0.22
APOA1P02647 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms