Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ALDH1A1P00352 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALDH1A1P00352 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
ALDH1A1P00352 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ALDH1A1P00352 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
ALDH1A1P00352 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALDH1A1P00352 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALDH1A1P00352 HLA-DMA-203ENST00000395305 777 ntBASIC17.08■□□□□ 0.32
ALDH1A1P00352 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALDH1A1P00352 TLE1P1-201ENST00000422965 589 ntBASIC17.08■□□□□ 0.32
ALDH1A1P00352 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ALDH1A1P00352 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALDH1A1P00352 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ALDH1A1P00352 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ALDH1A1P00352 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ALDH1A1P00352 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ALDH1A1P00352 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 AL645933.1-201ENST00000440087 609 ntBASIC17.07■□□□□ 0.32
ALDH1A1P00352 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 BX088702.1-201ENST00000610784 235 ntBASIC17.07■□□□□ 0.32
ALDH1A1P00352 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ALDH1A1P00352 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.07■□□□□ 0.32
ALDH1A1P00352 CYP4F23P-201ENST00000593402 1579 ntBASIC17.06■□□□□ 0.32
ALDH1A1P00352 MST1L-201ENST00000442552 2185 ntBASIC17.06■□□□□ 0.32
ALDH1A1P00352 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 CR383656.3-201ENST00000551315 183 ntBASIC17.06■□□□□ 0.32
ALDH1A1P00352 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 AP000322.3-201ENST00000608665 388 ntBASIC17.06■□□□□ 0.32
ALDH1A1P00352 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 AC006449.5-201ENST00000610658 2098 ntBASIC17.06■□□□□ 0.32
ALDH1A1P00352 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ALDH1A1P00352 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
ALDH1A1P00352 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms