Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TOP3BO95985 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
TOP3BO95985 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TOP3BO95985 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 LINC01101-201ENST00000622953 1884 ntBASIC15.67■□□□□ 0.1
TOP3BO95985 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TOP3BO95985 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.67■□□□□ 0.1
TOP3BO95985 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.67■□□□□ 0.1
TOP3BO95985 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TOP3BO95985 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TOP3BO95985 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.67■□□□□ 0.1
TOP3BO95985 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.67■□□□□ 0.1
TOP3BO95985 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.67■□□□□ 0.1
TOP3BO95985 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 SDHAP3-202ENST00000515467 728 ntBASIC15.67■□□□□ 0.1
TOP3BO95985 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.67■□□□□ 0.1
TOP3BO95985 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.67■□□□□ 0.1
TOP3BO95985 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC15.67■□□□□ 0.1
TOP3BO95985 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.67■□□□□ 0.1
TOP3BO95985 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 AL021578.1-201ENST00000613646 709 ntBASIC15.67■□□□□ 0.1
TOP3BO95985 MIR6727-201ENST00000620702 65 ntBASIC15.67■□□□□ 0.1
TOP3BO95985 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.67■□□□□ 0.1
TOP3BO95985 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
TOP3BO95985 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TOP3BO95985 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 FGD5P1-202ENST00000614866 2498 ntBASIC15.67■□□□□ 0.1
TOP3BO95985 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TOP3BO95985 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.67■□□□□ 0.1
TOP3BO95985 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TOP3BO95985 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.66■□□□□ 0.1
TOP3BO95985 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.66■□□□□ 0.1
TOP3BO95985 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.66■□□□□ 0.1
TOP3BO95985 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TOP3BO95985 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.66■□□□□ 0.1
TOP3BO95985 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 EEF1DP4-201ENST00000446006 880 ntBASIC15.66■□□□□ 0.1
TOP3BO95985 PHKG1P2-201ENST00000457537 863 ntBASIC15.66■□□□□ 0.1
TOP3BO95985 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.66■□□□□ 0.1
TOP3BO95985 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.66■□□□□ 0.1
TOP3BO95985 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.66■□□□□ 0.1
TOP3BO95985 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.66■□□□□ 0.1
TOP3BO95985 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.66■□□□□ 0.1
TOP3BO95985 AC117489.1-201ENST00000625169 3217 ntBASIC15.66■□□□□ 0.1
TOP3BO95985 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.66■□□□□ 0.1
TOP3BO95985 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.66■□□□□ 0.1
TOP3BO95985 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 AL607033.1-201ENST00000623900 1599 ntBASIC15.66■□□□□ 0.1
TOP3BO95985 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TOP3BO95985 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TOP3BO95985 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.66■□□□□ 0.1
TOP3BO95985 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TOP3BO95985 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TOP3BO95985 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TOP3BO95985 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms