Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
LTN1O94822 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LTN1O94822 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC19.64■□□□□ 0.74
LTN1O94822 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LTN1O94822 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LTN1O94822 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC19.64■□□□□ 0.73
LTN1O94822 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.64■□□□□ 0.73
LTN1O94822 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LTN1O94822 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LTN1O94822 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTN1O94822 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LTN1O94822 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LTN1O94822 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LTN1O94822 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LTN1O94822 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
LTN1O94822 AL627422.1-201ENST00000434104 580 ntBASIC19.64■□□□□ 0.73
LTN1O94822 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.64■□□□□ 0.73
LTN1O94822 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC19.64■□□□□ 0.73
LTN1O94822 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC19.64■□□□□ 0.73
LTN1O94822 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTN1O94822 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC19.64■□□□□ 0.73
LTN1O94822 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTN1O94822 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.64■□□□□ 0.73
LTN1O94822 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTN1O94822 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC19.64■□□□□ 0.73
LTN1O94822 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.64■□□□□ 0.73
LTN1O94822 AC092135.3-201ENST00000624151 1846 ntBASIC19.64■□□□□ 0.73
LTN1O94822 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LTN1O94822 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LTN1O94822 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LTN1O94822 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC19.63■□□□□ 0.73
LTN1O94822 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.63■□□□□ 0.73
LTN1O94822 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LTN1O94822 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LTN1O94822 RPSAP15-201ENST00000448168 861 ntBASIC19.63■□□□□ 0.73
LTN1O94822 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.63■□□□□ 0.73
LTN1O94822 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC19.63■□□□□ 0.73
LTN1O94822 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LTN1O94822 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
LTN1O94822 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC19.63■□□□□ 0.73
LTN1O94822 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
LTN1O94822 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC19.63■□□□□ 0.73
LTN1O94822 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC19.63■□□□□ 0.73
LTN1O94822 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LTN1O94822 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LTN1O94822 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LTN1O94822 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC19.62■□□□□ 0.73
LTN1O94822 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LTN1O94822 AL035414.1-201ENST00000451327 857 ntBASIC19.62■□□□□ 0.73
LTN1O94822 PGAM1P5-201ENST00000548011 764 ntBASIC19.62■□□□□ 0.73
LTN1O94822 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC19.62■□□□□ 0.73
LTN1O94822 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC19.62■□□□□ 0.73
LTN1O94822 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LTN1O94822 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LTN1O94822 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC19.62■□□□□ 0.73
LTN1O94822 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.62■□□□□ 0.73
LTN1O94822 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LTN1O94822 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LTN1O94822 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LTN1O94822 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.62■□□□□ 0.73
LTN1O94822 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.62■□□□□ 0.73
LTN1O94822 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
LTN1O94822 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC19.62■□□□□ 0.73
LTN1O94822 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.62■□□□□ 0.73
LTN1O94822 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.62■□□□□ 0.73
LTN1O94822 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LTN1O94822 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC19.62■□□□□ 0.73
LTN1O94822 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LTN1O94822 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms